Transcriptome profiling uncovers differentially expressed genes linked to nutritional quality in vegetable soybean
文献类型： 外文期刊
作者： Wang, Xueyang 1 ; Zhang, Chunlei 1 ; Yuan, Rongqiang 1 ; Liu, Xiulin 1 ; Zhang, Fengyi 1 ; Zhao, Kezhen 1 ; Zhang, Min 1 ; Abdelghany, Ahmed M. 2 ; Lamlom, Sobhi F. 3 ; Zhang, Bixian 4 ; Qiu, Qiang 5 ; Liu, Jia 5 ; Lu, Wencheng 6 ; Ren, Honglei 1 ;
作者机构： 1.Heilongjiang Acad Agr Sci, Soybean Res Inst, Harbin, Peoples R China
2.Damanhour Univ, Fac Agr, Crop Sci Dept, Damanhour, Egypt
3.Alexandria Univ, Fac Agr Saba Basha, Plant Prod Dept, Alexandria, Egypt
4.Heilongjiang Acad Agr Sci, Inst Biotechnol, Harbin, Peoples R China
5.Jilin Acad Agr Sci, Northeast Agr Res Ctr China, Soybean Res Inst, Changchun, Peoples R China
6.Heilongjiang Acad Agr Sci, Heihe Branch Inst, Heihe, Peoples R China
期刊名称：PLOS ONE （ 影响因子：2.6； 五年影响因子：3.2 ）
ISSN： 1932-6203
年卷期： 2024 年 19 卷 11 期
页码：
收录情况： SCI
摘要： Vegetative soybean (maodou or edamame) serves as a nutrient-rich food source with significant potential for mitigating global nutritional deficiencies. This study undertook a thorough examination of the nutritional profiles and transcriptomic landscapes of six soybean cultivars, including three common cultivars (Heinong551, Heinong562, and Heinong63) and three fresh maodou cultivars (Heinong527, HeinongXS4, and HeinongXS5). Nutrient analysis of the seeds disclosed notable differences in the levels of protein, fat, soluble sugars, vitamin E, calcium, potassium, magnesium, manganese, iron, and zinc across the cultivars. Through comparative transcriptome profiling and RNA sequencing, distinct variations in differentially expressed genes (DEGs) were identified between fresh and traditional maodou cultivars. Functional enrichment analyses underscored the involvement of DEGs in critical biological processes, such as nutrient biosynthesis, seed development, and stress responses. Additionally, association studies demonstrated robust correlations between specific DEG expression patterns and seed nutrient compositions across the different cultivars. Sankey diagrams illustrated that DEGs are strongly linked with seed quality traits, revealing potential molecular determinants that govern variations in nutritional content. The identified DEGs and their relationships with nutritional profiles offer valuable insights for breeding programs focused on developing cultivars with improved nutritional quality, tailored to specific dietary needs or industrial applications.
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