Genome-based risk assessment for foodborne Salmonella enterica from food animals in China: A One Health perspective
文献类型： 外文期刊
作者： Tang, Biao 1 ; Siddique, Abubakar 3 ; Jia, Chenhao 3 ; Ed-Dra, Abdelaziz 3 ; Wu, Jing 1 ; Lin, Hui 1 ; Yue, Min 3 ;
作者机构： 1.Zhejiang Acad Agr Sci, State Key Lab Managing Biot & Chem Threats Qual &, Hangzhou 310021, Zhejiang, Peoples R China
2.Zhejiang Acad Agr Sci, Inst Agroprod Safety & Nutr, Hangzhou 310021, Zhejiang, Peoples R China
3.Zhejiang Univ, Hainan Inst, Sanya 572025, Peoples R China
4.Natl Univ Sci & Technol NUST, Atta Ur Rahman Sch Appl Biosci ASAB, H-12, Islamabad 44000, Pakistan
5.Zhejiang Univ, Coll Anim Sci, Inst Prevent Vet Sci, Dept Vet Med, Hangzhou 310058, Peoples R China
6.Zhejiang Univ, Affiliated Hosp 1, Coll Med,State Key Lab Diag & Treatment Infect Di, Natl Med Ctr Infect Dis,Natl Clin Res Ctr Infect, Hangzhou, Peoples R China
7.Zhejiang Prov Key Lab Prevent Vet Med, Hangzhou, Peoples R China
关键词： Salmonella; Food animals; Whole genome sequencing; Antimicrobial resistance gene; One health
期刊名称：INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY （ 影响因子：5.4； 五年影响因子：5.5 ）
ISSN： 0168-1605
年卷期： 2023 年 390 卷
页码：
收录情况： SCI
摘要： Salmonella is one of the most common causes of foodborne bacterial disease. Animal-borne foods are considered the primary sources of Salmonella transmission to humans. However, genomic assessment of antimicrobial resistance (AMR) and virulence of Salmonella based on One Health approach remains obscure in China. For this reason, we analyzed the whole genome sequencing data of 134 Salmonella isolates recovered from different animal and meat samples in China. The 134 Salmonella were isolated from 2819 samples (4.75 %) representing various sources (pig, chicken, duck, goose, and meat) from five Chinese provinces (Zhejiang, Guangdong, Jiangxi, Hunan, and Qinghai). AMR was evaluated by the broth dilution method using 13 different antimicrobial agents, and results showed that 85.82 % (115/134) of isolates were resistant to three or more antimicrobial classes and were considered multidrug-resistant (MDR). Twelve sequence types (STs) were detected, with a dominance of ST469 (29.85 %, 40/134). The prediction of virulence genes showed the detection of cdtB gene encoding typhoid toxins in one isolate of S. Muenster recovered from chicken, while virulence genes associated with type III secretion systems were detected in all isolates. Furthermore, plasmid-type prediction showed the abundance of IncFII(S) (13/134; 9.7 %) and IncFIB(S) (12/134; 8.95 %) in the studied isolates. Together, this study demonstrated the ability to use whole-genome sequencing (WGS) as a cost-effective method to provide comprehensive knowledge about foodborne Salmonella isolates in One Health surveillance approach.
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