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Global analysis of expression profile of members ofDnaJgene families involved in capsaicinoids synthesis in pepper (Capsicum annuumL)

文献类型： 外文期刊

作者： Fan, Fang Fei 1 ; Liu, Fawan 2 ; Yang, Xian 1 ; Wan, Hongjian 3 ; Kang, Yunyan 1 ;

作者机构： 1.South China Agr Univ, Coll Hort, Guangzhou 510642, Peoples R China

2.Yunnan Acad Agr Sci, Hort Res Inst, Kunming 650231, Peoples R China

3.Zhejiang Acad Agr Sci, State Key Lab Managing Biot & Chem Threats Qual &, Inst Vegetables, Hangzhou 310021, Peoples R China

4.Zhejiang Acad Agr Sci, China Australia Res Ctr Crop Improvement, Hangzhou 310021, Peoples R China

关键词： DnaJ protein; Pepper; Expression analysis; Phylogenetics; Abiotic stresses

期刊名称：BMC PLANT BIOLOGY （ 影响因子：4.215； 五年影响因子：4.96 ）

ISSN： 1471-2229

年卷期： 2020 年 20 卷 1 期

页码：

收录情况： SCI

摘要： Background The DnaJ proteins play critical roles in plant development and stress responses. Recently, seventy-six DnaJ genes were identified through a comprehensive bioinformatics analysis in the pepper genome. However, there were no reports on understanding of phylogenetic relationships and diverse expression profile of pepper DnaJ genes to date. Herein, we performed the systemic analysis of the phylogenetic relationships and expression profile of pepper DnaJ genes in different tissues and in response to both abiotic stress and plant hormones. Results Phylogenetic analysis showed that all the pepper DnaJ genes were grouped into 7 sub-families (sub-family I, II, III, IV, V, VI and VII) according to sequence homology. The expression of pepper DnaJs in different tissues revealed that about 38% (29/76) of pepper DnaJs were expressed in at least one tissue. The results demonstrate the potentially critical role of DnaJs in pepper growth and development. In addition, to gain insight into the expression difference of pepper DnaJ genes in placenta between pungent and non-pungent, their expression patterns were also analyzed using RNA-seq data and qRT-PCR. Comparison analysis revealed that eight genes presented distinct expression profiles in pungent and non-pungent pepper. TheCaDnaJsco-expressed with genes involved in capsaicinoids synthesis during placenta development. What is more, our study exposed the fact that these eight DnaJ genes were probably regulated by stress (heat, drought and salt), and were also regulated by plant hormones (ABA, GA3, MeJA and SA). Conclusions In summary, these results showed that some DnaJ genes expressed in placenta may be involved in plant response to abiotic stress during biosynthesis of compounds related with pungency. The study provides wide insights to the expression profiles of pepper DanJ genes and contributes to our knowledge about the function of DnaJ genes in pepper.

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