中国水产科学研究院机构知识库

Development of MHC Class I and II B Primers in Common Carp and its Molecular Characterization

收藏
分享
全文链接

文献类型：外文期刊

作者： Jia, Zhiying ¹ ; Chi, Xifeng ¹ ; Li, Chitao ¹ ; Shi, Lianyu ¹ ;

作者机构： 1.Chinese Acad Fishery Sci, Heilongjiang River Fisheries Res Inst, Harbin 150070, Peoples R China

2.Shanghai Ocean Univ, Coll Fisheries & Life Sci, Shanghai 201306, Peoples R China

关键词： MHC;Common carp;Polymorphic;Variable nucleotide site

期刊名称：BIOCHEMICAL GENETICS （影响因子：1.89；五年影响因子：1.959 ）

ISSN： 0006-2928

年卷期： 2010 年 48 卷 7-8 期

页码：

收录情况： SCI

摘要： The major histocompatibility complex (MHC) has an important role in immune response and is known as the most polymorphic locus in vertebrates. We developed three pairs of polymerase chain reaction primers of the alpha-2 domain (exon 3) of MHC class I and the beta-2 (exon 3) and beta-3 domains (exon 4) of MHC class II B gene in the German mirror common carp (Cyprinus carpio L.). We analyzed the three loci in a population of 65 individuals that had suffered the serious disease of gill rot. Five to six variable nucleotide sites and two to six variable amino acid sites (71.43%) were detected in the exon sequence of the sampled populations, indicating that many of them corresponded to amino acids involved in antigen recognition. Deviation from Hardy-Weinberg equilibrium and linkage disequilibrium were differentially found in some loci, which will be important for further study of disease resistance/susceptibility and population evolution.

相关文献

[1]Predicted Body Weight of Progeny Obtained by a Three-Way Cross and Back Cross Based on a 3 × 3 Complete Diallel Cross of Common Carp (Cyprinus carpi). Shengyan Su,Zaijie Dong,Xuebin Li,Xinhua Yuan,Pao Xu,Zhuang Xie. 2011

[2]Novel polymorphic microsatellite markers isolated from the pen shell Atrina pectinata (Mollusca: Bivalvia: Pinnidae). Wu, B.,Bai, L. J.,Yang, A. G.,Zhou, L. Q.,Liu, Z. H.,Bai, L. J.. 2014

[3]Characterization of 15 polymorphic microsatellite loci for the jellyfish Rhopilema esculentum. Zhu, Ling,Yang, Ao-ao,Zhou, Chun-ya,Yang, Hong,Luo, Xiao-rui,Chen, Si-Qing,Zhuang, Zhi-meng,Yang, Ao-ao,Yang, Hong,Luo, Xiao-rui.

[4]大菱鲆MHCⅡB基因全长CDNA的克隆与组织表达分析. 张玉喜,陈松林. 2006

[5]中草药添加剂对山女鳟体内MHC及IL-1β含量的影响. 王荻,穆桂强,刘红柏. 2013

[6]鲤鱼6个群体间MHCⅡB基因第3外显子的多态性分析. 闵霞,贾智英,李池陶,李飞,石连玉. 2012

[7]甲醛及孔雀石绿对哲罗鲑发眼卵MHC及IL-1β含量的影响. 李绍戊,王荻,卢彤岩. 2013

[8]大菱鲆(Scophthalmus maximus)MHCⅡA基因全长cDNA的克隆与组织表达分析. 张玉喜,陈松林. 2007

[9]败血症鲢肝与肾cDNA文库构建及MHC classⅠ的克隆与分析. 汪登强,罗晓松,陈大庆. 2011

[10]鱼类MHC及其基因研究进展. 徐田军,陈松林. 2008

[11]A genetic linkage map and comparative genome analysis of common carp (Cyprinus carpio L.) using microsatellites and SNPs. Zheng, Xianhu,Kuang, Youyi,Zhang, Xiaofeng,Lu, Cuiyun,Cao, Dingchen,Li, Chao,Sun, Xiaowen,Zheng, Xianhu. 2011

[12]High Throughput Mining and Characterization of Microsatellites from Common Carp Genome. Ji, Peifeng,Zhang, Yan,Zhao, Zixia,Wang, Jian,Li, Jiongtang,Xu, Peng,Sun, Xiaowen,Li, Chao,Sun, Xiaowen. 2012

[13]Genome evolution trend of common carp (Cyprinus carpio L.) as revealed by the analysis of microsatellite loci in a gynogentic family. Zhang, Yan,Liang, Liqun,Jiang, Peng,Li, Dayu,Lu, Cuiyun,Sun, Xiaowen,Zhang, Yan,Jiang, Peng,Li, Dayu. 2008

[14]Development and evaluation of the first high-throughput SNP array for common carp (Cyprinus carpio). Xu, Jian,Zhao, Zixia,Li, Jiongtang,Jiang, Yanliang,Zhang, Yan,Li, Qiang,Zhu, Yuanyuan,Liu, Yuanyuan,Xu, Peng,Sun, Xiaowen,Zhang, Xiaofeng,Zheng, Xianhu,Kuang, Youyi,Sun, Xiaowen,Feng, Jianxin,Li, Chuangju,Yu, Juhua,Xu, Peng. 2014

[15]Use and exchange of aquatic resources relevant for food and aquaculture: common carp (Cyprinus carpio L.). Jeney, Zsigmond,Jian, Zhu. 2009

[16]Accumulation, histopathological effects and response of biochemical markers in the spleens and head kidneys of common carp exposed to atrazine and chlorpyrifos. Wang, Xu,Xing, Houjuan,Jiang, Yan,Xu, Shiwen,Xing, Houjuan,Sun, Gang,Wu, Hongda,Xu, Qiyou. 2013

[17]A Consensus Linkage Map Provides Insights on Genome Character and Evolution in Common Carp (Cyprinus carpio L.). Zhang, Xiaofeng,Zheng, Xianhu,Kuang, Youyi,Li, Chao,Cao, Dingchen,Lu, Cuiyun,Sun, Xiaowen,Zhang, Yan,Zhao, Zixia,Zhao, Lan,Jiang, Li,Xu, Peng. 2013

[18]Transcriptome analysis reveals the time of the fourth round of genome duplication in common carp (Cyprinus carpio). Wang, Jin-Tu,Li, Jiong-Tang,Sun, Xiao-Wen,Wang, Jin-Tu,Zhang, Xiao-Feng. 2012

[19]Identification of common carp (Cyprinus carpio) microRNAs and microRNA-related SNPs. Zhu, Ya-Ping,Xue, Wei,Wang, Jin-Tu,Wan, Yu-Mei,Xu, Peng,Zhang, Yan,Li, Jiong-Tang,Sun, Xiao-Wen,Zhu, Ya-Ping,Xue, Wei,Wang, Jin-Tu,Wang, Shao-Lin. 2012

[20]A genetic linkage map of common carp (Cyprinus carpio L.) And mapping of a locus associated with cold tolerance. Sun, XW,Liang, LQ. 2004

作者其他论文更多>>

Chromosome-level genome assembly and annotation of Amur Pike (Esox reichertii)

作者：Zhang, Yuyong;Zhang, Yongquan;Huo, Tangbin;Jia, Zhiying;Qogt, Gerel;Zhang, Ping;Zhang, Huiping

关键词：
Effects of Dietary Protein Levels on the Growth, Physiological, and Biochemical Indices of Juvenile Yellow River Carp (Cyprinus carpio haematopterus)

作者：Jiang, Xiaona;Qu, Feihu;Ge, Yanlong;Li, Chitao;Shi, Xiaodan;Hu, Xuesong;Cheng, Lei;Zhao, Xinyu;Jia, Zhiying;Jiang, Xiaona;Qu, Feihu;Ge, Yanlong;Li, Chitao;Shi, Xiaodan;Hu, Xuesong;Cheng, Lei;Zhao, Xinyu;Jia, Zhiying

关键词：Yellow River carp; dietary protein; regression equations; muscle quality; enzyme activities
Autophagy mediated degradation of MITA/TBK1/IRF3 by a hnRNP family member attenuates interferon production in fish

作者：Zhang, Yanwei;Cen, Jing;Wu, Haixia;Gao, Wa;Zou, Jun;Zhang, Yanwei;Cen, Jing;Wu, Haixia;Gao, Wa;Zou, Jun;Zhang, Yanwei;Cen, Jing;Wu, Haixia;Gao, Wa;Zou, Jun;Jia, Zhiying;Adamek, Mikolaj;Zou, Jun

关键词：HnRNP A/B; Virus; Interferon; Autophagy
A New Mutagenesis Tool for Songpu Mirror Carp (Cyprinus carpio L.) for Selective Breeding: Atmospheric-Pressure Room-Temperature Plasma Mutagenesis Technology

作者：Jiang, Xiaona;Li, Chitao;Shang, Mei;Hu, Xuesong;Ge, Yanlong;Jia, Zhiying;Jiang, Xiaona;Li, Chitao;Shang, Mei;Hu, Xuesong;Ge, Yanlong;Jia, Zhiying

关键词：ARTP; Songpu mirror carp; CV; serum indicators; relative expression
Cloning and Identification of Common Carp (Cyprinus carpio) PI3KC3 and Its Expression in Response to CyHV-3 Infection

作者：Jiang, Xiaona;Tian, Lijing;Ren, Wanying;Li, Chitao;Hu, Xuesong;Ge, Yanlong;Cheng, Lei;Shi, Xiaodan;Jia, Zhiying;Jiang, Xiaona;Tian, Lijing;Ren, Wanying;Li, Chitao;Hu, Xuesong;Ge, Yanlong;Cheng, Lei;Shi, Xiaodan;Jia, Zhiying

关键词：CcPI3KC3; common carp; cloning; structural features; CyHV-3
Effects of Dietary Lipid Levels on the Growth, Muscle Fatty Acid and Amino Acid Composition, Antioxidant Capacity, and Lipid Deposition in Mirror Carp (Cyprinus carpio)

作者：Jiang, Xiaona;Song, Zhenguo;Li, Chitao;Hu, Xuesong;Ge, Yanlong;Cheng, Lei;Shi, Xiaodan;Jia, Zhiying;Jiang, Xiaona;Song, Zhenguo;Li, Chitao;Hu, Xuesong;Ge, Yanlong;Cheng, Lei;Shi, Xiaodan;Jia, Zhiying

关键词：mirror carp; dietary lipids; weight gain rate; serum lipid-related indices; DHA plus EPA; antioxidant enzyme activity
IRF9 inhibits CyHV-3 replication by regulating the PI3K-AKT signalling pathway in common carp (Cyprinus carpio) epithelial cells

作者：Jiang, Xiaona;Ren, Wanying;Tian, Lijing;Ge, Yanlong;Li, Chitao;Hu, Xuesong;Shi, Lianyu;Jia, Zhiying;Jiang, Xiaona;Ren, Wanying;Tian, Lijing;Ge, Yanlong;Li, Chitao;Hu, Xuesong;Shi, Lianyu;Jia, Zhiying

关键词：IRF9; CyHV-3; CCF cells; Mx1; PI3K-AKT signalling pathway

Development of MHC Class I and II B Primers in Common Carp and its Molecular Characterization

作者其他论文 更多>>

Chromosome-level genome assembly and annotation of Amur Pike (Esox reichertii)

Effects of Dietary Protein Levels on the Growth, Physiological, and Biochemical Indices of Juvenile Yellow River Carp (Cyprinus carpio haematopterus)

Autophagy mediated degradation of MITA/TBK1/IRF3 by a hnRNP family member attenuates interferon production in fish

A New Mutagenesis Tool for Songpu Mirror Carp (Cyprinus carpio L.) for Selective Breeding: Atmospheric-Pressure Room-Temperature Plasma Mutagenesis Technology

Cloning and Identification of Common Carp (Cyprinus carpio) PI3KC3 and Its Expression in Response to CyHV-3 Infection

Effects of Dietary Lipid Levels on the Growth, Muscle Fatty Acid and Amino Acid Composition, Antioxidant Capacity, and Lipid Deposition in Mirror Carp (Cyprinus carpio)

IRF9 inhibits CyHV-3 replication by regulating the PI3K-AKT signalling pathway in common carp (Cyprinus carpio) epithelial cells

意 见 箱

作者其他论文更多>>

意见箱