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Multiple crRNAs-assisted CRISPR/Cas12a assay targeting cytochrome b gene for amplification-free detection of meat adulteration

文献类型: 外文期刊

作者: Chen, Yanju 1 ; Yang, Tianyi 1 ; Qian, Siwenjie 1 ; Peng, Cheng 2 ; Wang, Xiaofu 2 ; Wang, Tingzhang 4 ; Che, Yang 4 ; Ji, Feng 3 ; Wu, Jian 1 ; Xu, Junfeng 2 ;

作者机构: 1.Zhejiang Univ, Coll Biosyst Engn & Food Sci, Hangzhou 310058, Peoples R China

2.Zhejiang Acad Agr Sci, State Key Lab Managing Biot & Chem Threats Qual &, Hangzhou 310021, Peoples R China

3.Zhejiang Univ, Affiliated Hosp 1, Sch Med, Hangzhou 310003, Peoples R China

4.Zhejiang Inst Microbiol, Key Lab Microbiol Technol & Bioinformat Zhejiang P, Hangzhou 310012, Peoples R China

5.ZJU Hangzhou Global Sci & Technol Innovat Ctr, 733,Jianshe 3rd Rd, Hangzhou 311200, Peoples R China

关键词: Clustered regularly interspaced short; palindromic repeats; Multiple crRNAs; Amplification -free; Cytochrome b; Food adulteration

期刊名称:ANALYTICA CHIMICA ACTA ( 影响因子:6.911; 五年影响因子:6.467 )

ISSN: 0003-2670

年卷期: 2022 年 1231 卷

页码:

收录情况: SCI

摘要: Clustered regularly interspaced short palindromic repeats (CRISPR)/Cas systems have been widely applied in nucleic acid analysis for the high specificity. Coupled with pre-amplification steps, the sensitivity of CRISPR-based detection is greatly improved. However, an extra pre-amplification step not only complicates the detec-tion procedures but may also cause aerosol contaminations in the process of transferring amplified solution into CRISPR system. In this study, we demonstrate that combination of multiple crRNAs in CRISPR/Cas12a system can enhance the detection sensitivity. Based on it, we establish a multiple crRNAs enhanced CRISPR (meCRISPR) method and apply it to meat adulteration identification. Take cytochrome b (Cyt b) gene as a target, meCRISPR method can directly detect as low as 1.13 ng/mu L extracted pork DNA and 5% (w/w) pork contamination in pork and beef meat mixtures. There is no cross-reaction with extracted chicken, beef, duck and fish DNA. meCRISPR reaction is incubated at an isothermal temperature, and the detection process can be completed in a designed portable apparatus with a heat block, a light emitting diode and filters. For the simplicity, specificity and sufficient sensitivity of meCRISPR method, it will have great prospects in species identification, food adultera-tion, and genetically modified food detection.

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