Isolation and characterization of polymorphic microsatellite loci from fat greenling (Hexagrammos otakii)
文献类型: 外文期刊
作者: Chen, Song-Lin 1 ; Miao, Gui-Dong 1 ; Shao, Chang-Wei 1 ; Tian, Yong-Sheng 1 ; Liao, Xiaolin 1 ;
作者机构: 1.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Minist Agr, Key Lab Sustainable Utilizat Marine Fisheries Res, Qingdao 266071, Peoples R China
关键词: Fat greenling;Hexagrammos otakii;Enriched genomic library;SSR;Microsatellites
期刊名称:CONSERVATION GENETICS ( 影响因子:2.538; 五年影响因子:2.32 )
ISSN: 1566-0621
年卷期: 2009 年 10 卷 5 期
页码:
收录情况: SCI
摘要: Fat greenling (Hexagrammos otakii) is an economocally important marine fish species. Thirtyfive microsatellite loci were isolated from two enriched genomic library of Hexagrammos otakii. Ten of these loci were polymorphic in a test population with alleles per locus ranging from two to six, and observed and expected heterozygosities per locus from 0.2581 to 1.0000 and from 0.2892 to 0.7726, respectively. Four loci significantly deviated from Hardy-Weinberg equilibrium after Bonferroni correction and no significant linkage disequilibrium was found between pairs of loci. These polymorphic microsatellite loci would be useful for investigating genetic diversity of Hexagrammos otakii.
- 相关文献
作者其他论文 更多>>
-
Molecular cloning, expression, and functional analyses of plasmanylethanolamine desaturase gene of Takifugu rubripes
作者:Ji, Hong-Long;Ji, Hong-Long;Liu, Chang;Zhang, Jing-Jing;Lin, Lei;Yang, Qi;Yang, Yu;Dong, Cai-Chao;He, Yang-bin;Shao, Chang-wei;Liu, Chang;Zhang, Jing-Jing;Lin, Lei;Yang, Qi;Yang, Yu;Dong, Cai-Chao;He, Yang-bin;Shao, Chang-wei
关键词:Plasmalogen; Tmem189; Expression
-
Molecular phylogenetic relationships based on mitochondrial genomes of novel deep-sea corals (Octocorallia: Alcyonacea): Insights into slow evolution and adaptation to extreme deep-sea environments
作者:Wei, Zhan-Fei;Liu, Kai-Qiang;Shao, Chang-Wei;Zhang, Nan-Nan;Liu, Shan-Shan;Meng, Liang;Cai, Chong-Yang;Ta, Kai-Wen;Peng, Xiao-Tong
关键词:Mitochondrial genome; Alcyonacea; Ka/Ks evolution; Environmental factors
-
Establishment, characterization and application of Largemouth bronze gudgeon ( Coreius guichenoti ) fin and skin cell lines in disease resistance
作者:Zhang, Qi;Shi, Yuhong;Liao, Xiaolin;Tian, Hua;Zhang, Qi;Gong, Zhihong;Shi, Rui;Shi, Yuhong;Guo, Chenfei;Wang, Na;Gong, Zhihong
关键词:Largemouth bronze gudgeon(Coreius guichenoti); Cell lines; Skin; Fin; Spring viremia of carp virus (SVCV)
-
Molecular phylogenetic relationships based on mitochondrial genomes of novel deep-sea corals (Octocorallia: Alcyonacea): Insights into slow evolution and adaptation to extreme deep-sea environments
作者:Wei, Zhan-Fei;Liu, Kai-Qiang;Shao, Chang-Wei;Wei, Zhan-Fei;Ta, Kai-Wen;Zhang, Nan-Nan;Liu, Shan-Shan;Meng, Liang;Liu, Kai-Qiang;Cai, Chong-Yang;Peng, Xiao-Tong
关键词:Mitochondrial genome; Alcyonacea; Ka/Ks evolution; Environmental factors
-
Combined ATAC-seq, RNA-seq, and GWAS analysis reveals glycogen metabolism regulatory network in Jinjiang oyster (Crassostrea ariakensis)
作者:Wu, Biao;Chen, Xi;Wang, Zhen-Yuan;Wang, Yan;Shao, Chang-Wei;Zhou, Li-Qing;Sun, Xiu-Jun;Liu, Zhi-Hong;Wu, Biao;Chen, Xi;Shao, Chang-Wei;Zhou, Li-Qing;Sun, Xiu-Jun;Liu, Zhi-Hong;Hu, Jie;Xu, Da-You;Guo, Hao-Bing;Fan, Guang-Yi;Wang, Zhen-Yuan;Yu, Tao;Wang, Xiao-Mei;Zheng, Yan-Xin;Fan, Guang-Yi
关键词:Crassostrea ariakensis; Glycogen; Transcriptome; ATAC; GWAS
-
Combined ATAC-seq, RNA-seq, and GWAS analysis reveals glycogen metabolism regulatory network in Jinjiang oyster (Crassostrea ariakensis)
作者:Wu, Biao;Chen, Xi;Wang, Zhen-Yuan;Wang, Yan;Shao, Chang-Wei;Zhou, Li-Qing;Sun, Xiu-Jun;Liu, Zhi-Hong;Wu, Biao;Chen, Xi;Shao, Chang-Wei;Zhou, Li-Qing;Sun, Xiu-Jun;Liu, Zhi-Hong;Hu, Jie;Xu, Da-You;Guo, Hao-Bing;Fan, Guang-Yi;Wang, Zhen-Yuan;Xu, Da-You;Shao, Chang-Wei;Yu, Tao;Wang, Xiao-Mei;Zheng, Yan-Xin;Fan, Guang-Yi
关键词:Crassostrea ariakensis; Glycogen; Transcriptome; ATAC; GWAS
-
Identification of Aeromonas veronii as the Pathogen Associated with Massive Mortality in Bronze Gudgeon (Coreius heterodon)
作者:Liu, Wenzhi;Li, Mengmeng;Xue, Mingyang;Zhou, Yong;Jiang, Nan;Meng, Yan;Liu, Yisha;Jiang, Jingwen;Fan, Yuding;Li, Mengmeng;Fan, Yuding;Liu, Yisha;Jiang, Jingwen;Fan, Yuding;Liao, Xiaolin
关键词:bronze gudgeon (Coreius heterodon); Aeromonas veronii; virulence genes; blood parameters; phylogenetic analysis



