Parentage determination of Chinese shrimp (Fenneropenaeus chinensis) based on microsatellite DNA markers
文献类型: 外文期刊
作者: Dong, Shirui 1 ; Kong, Jie 2 ; Zhang, Tianshi 2 ; Meng, Xianhong 2 ; Wang, Rucai 3 ;
作者机构: 1.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Key Lab Sustainable Utilizat Marine Fisheries Res, Minist Agr, Qingdao 266071, Peoples R China
2.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Key Lab Sustainable Utilizat Marine Fisheries Res, Minist Agr, Qingdao 266071, Peoples R China; Ocean Univ Qingdao, Coll Marine Life Sci, Qingdao 266003, Peoples R China
3.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Key Lab Sustainable Utilizat Marine Fisheries Res, Minist Agr, Qingdao 266071, Peoples R China; Ocean Univ Qingdao, Coll Marine Li
关键词: Fenneropenaeus chinensis;parentage determination;microsatellite marker;shrimp
期刊名称:AQUACULTURE ( 影响因子:4.242; 五年影响因子:4.723 )
ISSN: 0044-8486
年卷期: 2006 年 258 卷 1-4 期
页码:
收录情况: SCI
摘要: This study was initiated to assess the feasibility of parentage determination in aquaculture populations for Chinese shrimp (Fenneropenaeus chinensis). Under different scenarios both simulation and real, we used microsatellite markers to assign parentage to offspring. Simulations based on allele frequency data from the population of Chinese shrimp demonstrated that 4 loci were required to assign 95% and 5 loci to assign 97% of progeny. When marker data from five loci were combined, the assignment success of progeny to their true parental couple increased to 92.9% in parentage identification with known parental and filial information. Out of 215 offspring, 90.7% was assigned to their parental pairs exclusively in mixed families groups. Discrepancies between the simulations and real data sets were considered to be largely due to the mismatches caused by scoring errors at microsatellite loci. Based on these results, we conclude that the use of a number of microsatellite markers represents a realistic and effective alternative to physical tagging in a selection program and it allows the identification of parental effects on offspring performances from early life stages. (c) 2006 Elsevier B.V. All rights reserved.
- 相关文献
作者其他论文 更多>>
-
Copy Number Variations in Short Tandem Repeats Modulate Growth Traits in Penaeid Shrimp Through Neighboring Gene Regulation
作者:Zhou, Hao;Qiang, Guangfeng;Xia, Yan;Tan, Jian;Fu, Qiang;Luo, Kun;Meng, Xianhong;Chen, Baolong;Chen, Meijia;Sui, Juan;Dai, Ping;Li, Xupeng;Liu, Mianyu;Kong, Jie;Luan, Sheng;Zhou, Hao;Qiang, Guangfeng;Xia, Yan;Tan, Jian;Fu, Qiang;Luo, Kun;Meng, Xianhong;Chen, Baolong;Chen, Meijia;Sui, Juan;Dai, Ping;Li, Xupeng;Liu, Mianyu;Kong, Jie;Luan, Sheng;Xing, Qun
关键词:short tandem repeats; STR; growth trait; penaeid shrimp; molecular breeding
-
Genomic selection of resistance to acute hepatopancreatic necrosis disease in Litopenaeus vannamei
作者:Liu, Mianyu;Li, Xupeng;Kong, Jie;Meng, Xianhong;Luo, Kun;Sui, Juan;Dai, Ping;Tan, Jian;Cao, Jiawang;Chen, Baolong;Luan, Sheng;Liu, Mianyu;Li, Xupeng;Kong, Jie;Meng, Xianhong;Luo, Kun;Sui, Juan;Dai, Ping;Tan, Jian;Cao, Jiawang;Chen, Baolong;Luan, Sheng;Wang, Hongjie
关键词:Genomic selection; Single-step genomic evaluation; Progeny testing; AHPND resistance; Litopenaeus vannamei
-
Genomic Evaluation of Harvest Weight Uniformity in Penaeus vannamei Under a 3FAM Design Incorporating Indirect Genetic Effect
作者:Gao, Siqi;Tian, Yi;Gao, Siqi;Xia, Yan;Kong, Jie;Meng, Xianhong;Luo, Kun;Sui, Juan;Dai, Ping;Tan, Jian;Li, Xupeng;Cao, Jiawang;Chen, Baolong;Fu, Qiang;Liu, Junyu;Luan, Sheng;Gao, Siqi;Xia, Yan;Kong, Jie;Meng, Xianhong;Luo, Kun;Sui, Juan;Dai, Ping;Tan, Jian;Li, Xupeng;Cao, Jiawang;Chen, Baolong;Fu, Qiang;Liu, Junyu;Luan, Sheng;Xing, Qun
关键词:
Penaeus vannamei ; harvest weight uniformity; indirect genetic effects; H matrix; genetic parameters -
Genomic selection strategies to overcome genotype by environment interactions in biosecurity-based aquaculture breeding programs
作者:Kang, Ziyi;Kong, Jie;Sui, Juan;Dai, Ping;Luo, Kun;Meng, Xianhong;Chen, Baolong;Cao, Jiawang;Tan, Jian;Fu, Qiang;Luan, Sheng;Kang, Ziyi;Kong, Jie;Sui, Juan;Dai, Ping;Luo, Kun;Meng, Xianhong;Chen, Baolong;Cao, Jiawang;Tan, Jian;Fu, Qiang;Luan, Sheng;Kang, Ziyi;Li, Qi;Xing, Qun
关键词:
-
Plankton community diversity-driven mutualism in medium-salinity ponds enhances growth of pacific white shrimp Penaeus vannamei
作者:Li, Ying;Wang, Yunfei;Zhang, Jihong;Sun, Yiru;Kong, Jie;Li, Ying;Zhang, Jihong;Wang, Yunfei
关键词:Salinity; Pacific white shrimp Penaeus vannamei; Plankton community; Aquaculture ponds; Environmental factors
-
Genomic selection for hard-to-measure traits in aquaculture: Challenges in balancing genetic gain and diversity
作者:Kang, Ziyi;Kong, Jie;Sui, Juan;Dai, Ping;Luo, Kun;Meng, Xianhong;Chen, Baolong;Cao, Jiawang;Tan, Jian;Fu, Qiang;Luan, Sheng;Kang, Ziyi;Kong, Jie;Sui, Juan;Dai, Ping;Luo, Kun;Meng, Xianhong;Chen, Baolong;Cao, Jiawang;Tan, Jian;Fu, Qiang;Luan, Sheng;Kang, Ziyi;Li, Qi;Wang, Zhaoxin
关键词:The family-based selective breeding program; Genomic selection; Long-term selection; Genetic diversity; Conversion efficiency
-
Multi-Trait Genomic Prediction of Meat Yield in Pacific Whiteleg Shrimp (Penaeus vannamei)
作者:Zhang, Shiwei;Tian, Yi;Zhang, Shiwei;Kong, Jie;Tan, Jian;Meng, Xianhong;Dai, Ping;Cao, Jiawang;Luo, Kun;Liu, Mianyu;Sui, Juan;Luan, Sheng;Zhang, Shiwei;Kong, Jie;Tan, Jian;Meng, Xianhong;Dai, Ping;Cao, Jiawang;Luo, Kun;Liu, Mianyu;Sui, Juan;Luan, Sheng;Liu, Mianyu;Xing, Qun
关键词:
Penaeus vannamei ; meat yield; net meat weight; heritability; multi-trait genomic prediction



