Parentage determination of Chinese shrimp (Fenneropenaeus chinensis) based on microsatellite DNA markers
文献类型: 外文期刊
作者: Dong, Shirui 1 ; Kong, Jie 2 ; Zhang, Tianshi 2 ; Meng, Xianhong 2 ; Wang, Rucai 3 ;
作者机构: 1.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Key Lab Sustainable Utilizat Marine Fisheries Res, Minist Agr, Qingdao 266071, Peoples R China
2.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Key Lab Sustainable Utilizat Marine Fisheries Res, Minist Agr, Qingdao 266071, Peoples R China; Ocean Univ Qingdao, Coll Marine Life Sci, Qingdao 266003, Peoples R China
3.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Key Lab Sustainable Utilizat Marine Fisheries Res, Minist Agr, Qingdao 266071, Peoples R China; Ocean Univ Qingdao, Coll Marine Li
关键词: Fenneropenaeus chinensis;parentage determination;microsatellite marker;shrimp
期刊名称:AQUACULTURE ( 影响因子:4.242; 五年影响因子:4.723 )
ISSN: 0044-8486
年卷期: 2006 年 258 卷 1-4 期
页码:
收录情况: SCI
摘要: This study was initiated to assess the feasibility of parentage determination in aquaculture populations for Chinese shrimp (Fenneropenaeus chinensis). Under different scenarios both simulation and real, we used microsatellite markers to assign parentage to offspring. Simulations based on allele frequency data from the population of Chinese shrimp demonstrated that 4 loci were required to assign 95% and 5 loci to assign 97% of progeny. When marker data from five loci were combined, the assignment success of progeny to their true parental couple increased to 92.9% in parentage identification with known parental and filial information. Out of 215 offspring, 90.7% was assigned to their parental pairs exclusively in mixed families groups. Discrepancies between the simulations and real data sets were considered to be largely due to the mismatches caused by scoring errors at microsatellite loci. Based on these results, we conclude that the use of a number of microsatellite markers represents a realistic and effective alternative to physical tagging in a selection program and it allows the identification of parental effects on offspring performances from early life stages. (c) 2006 Elsevier B.V. All rights reserved.
- 相关文献
作者其他论文 更多>>
-
Characterization of Eighty-Eight Single-Nucleotide Polymorphism Markers in the Manila Clam Ruditapes philippinarum Based on High-Resolution Melting (HRM) Analysis
作者:Zheng, Sichen;Wu, Biao;Zhou, Liqing;Liu, Zhihong;Zhang, Tianshi;Sun, Xiujun;Zheng, Sichen;Wu, Biao;Zhou, Liqing;Liu, Zhihong;Zhang, Tianshi;Sun, Xiujun;Zheng, Sichen;Chen, Yancui
关键词:Ruditapes philippinarum; RAD-seq; SNP; high-resolution melting
-
Analysis of Elimination Effects of Inbreeding on Genotype Frequency in Larval Stages of Chinese Shrimp
作者:Fu, Qiang;Zhou, Jingxin;Luan, Sheng;Dai, Ping;Lyu, Ding;Chen, Baolong;Luo, Kun;Kong, Jie;Meng, Xianhong;Fu, Qiang;Zhou, Jingxin;Luan, Sheng;Dai, Ping;Lyu, Ding;Chen, Baolong;Luo, Kun;Kong, Jie;Meng, Xianhong
关键词:Fenneropenaeus chinensis; inbreeding; larval development; segregation distortion; SNPs
-
Comparative Transcriptomic Analysis of WSSV-Challenged Penaeus vannamei with Variable Resistance Levels
作者:Li, Xupeng;Xue, Qian;Luan, Sheng;Luo, Kun;Kong, Jie;Meng, Xianhong;Li, Xupeng;Luan, Sheng;Kong, Jie;Meng, Xianhong
关键词:WSSV; Penaeus vannamei; immunity; family; resistant ability; viral load; transcriptome
-
A Novel Transposon Tn7709 Harbors Multidrug Resistance Genes in a Pathogenic Aeromonas media Strain QST31
作者:Shang, Baodi;Li, Xiaoyi;Zhang, Xiaoping;Zhang, Meiyan;Kong, Jie;Wang, Jinle;Zhao, Feng;Tan, Aiping;Zhang, Defeng;Tan, Aiping;Zhang, Defeng
关键词:Aeromonas media; antimicrobial resistance genes; transposon; integron; tadpoles
-
Reproductive Ability Disparity in the Pacific Whiteleg Shrimp (Penaeus vannamei): Insights from Ovarian Cellular and Molecular Levels
作者:Zhang, Jianchun;Kong, Jie;Cao, Jiawang;Dai, Ping;Chen, Baolong;Tan, Jian;Meng, Xianhong;Luo, Kun;Fu, Qiang;Luan, Sheng;Sui, Juan;Zhang, Jianchun;Kong, Jie;Cao, Jiawang;Dai, Ping;Chen, Baolong;Tan, Jian;Meng, Xianhong;Luo, Kun;Fu, Qiang;Luan, Sheng;Sui, Juan;Wei, Peiming
关键词:Penaeus vannamei; fecundity; mitochondria; EHF; PRDM9
-
Prevalence investigation of translucent post-larvae disease (TPD) in China
作者:Jia, Tianchang;Liu, Shuang;Yu, Xingtong;Xu, Tingting;Xia, Jitao;Zhao, Wenxiu;Wang, Wei;Kong, Jie;Zhang, Qingli;Jia, Tianchang;Kong, Jie;Zhang, Qingli;Zhang, Qingli
关键词:Shrimp; Translucent post-larvae disease (TPD); Clinical epidemiological investigation; Pathogenic strain diversity
-
Molecular Characterization and Expression Analysis of the C-Type Lectin Domain Family 4 Member F in Litopenaeus vannamei against White Spot Syndrome Virus
作者:Xue, Qian;Yang, Bingbing;Luo, Kun;Luan, Sheng;Kong, Jie;Li, Xupeng;Meng, Xianhong;Xue, Qian;Luan, Sheng;Kong, Jie;Li, Xupeng;Meng, Xianhong
关键词:viral disease control; innate immunity; LvCLEC4F; WSSV; gene expression; RNAi