Transcriptomic and physiological analyses of Medicago sativa L. roots in response to lead stress
文献类型： 外文期刊
作者： Xu, Bo 1 ; Wang, Yingzhe 2 ; Zhang, Shichao 1 ; Guo, Qiang 1 ; Jin, Yan 1 ; Chen, Jingjing 1 ; Gao, Yunhang 1 ; Ma, Hongx 1 ;
作者机构： 1.Jilin Agr Univ, Coll Anim Sci & Technol, Changchun, Jilin, Peoples R China
2.Jilin Acad Agr Sci, Agrobiotechnol Res Inst, Gongzhuling, Jilin, Peoples R China
期刊名称：PLOS ONE （ 影响因子：3.24； 五年影响因子：3.788 ）
ISSN： 1932-6203
年卷期： 2017 年 12 卷 4 期
页码：
收录情况： SCI
摘要： Lead (Pb) is one of the nonessential and toxic metals that threaten the environment and human health. Medicago sativa L. is a legume with high salt tolerance and high biomass production. It is not only a globally important forage crop but is also an ideal plant for phytore-mediation. However, the biological and molecular mechanisms that respond to heavy metals are still not well defined in M. sativa. In this study, de novo and strand-specific RNA-sequencing was performed to identify genes involved in the Pb stress response in M. sativa roots. A total of 415,350 unigenes were obtained from the assembled cDNA libraries, among which 5,416 were identified as significantly differentially expressed genes (DEGs) (false discovery rate < 0.005) between cDNA libraries from control and Pb-treated plants. Gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses of the DEGs showed they mainly clustered with terms associated with binding, transport, membranes, and the pathways related to signal and energy metabolism. Moreover, a number of candidate genes included antioxidant enzymes, metal transporters, and transcription factors involved in heavy metal response were upregulated under Pb stress. Quantitative real-time PCR(qRT-PCR) validation of the expression patterns of 10 randomly selected candidate DEGs were consistent with the transcriptome analysis results. Thus, this study offers new information towards the investigation of biological changes and molecular mechanisms related to Pb stress response in plants.
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