Characterization of the chloroplast genome of Chlorolobion braunii ITBB-AG6 isolated from a treatment pond of sanitary sewage
文献类型： 外文期刊
作者： Mu, Yaojia 1 ; Ma, Shuai 2 ; Tan, Deguan 2 ; Sun, Xuepiao 1 ; Zhang, Jiaming 2 ;
作者机构： 1.Hainan Univ, Coll Agr, Haikou, Peoples R China
2.Chinese Acad Trop Agr Sci, Inst Trop Biosci & Biotechnol, Hainan Bioenergy Ctr, Hainan Key Lab Microbiol Resources, Haikou, Peoples R China
3.Chinese Acad Trop Agr Sci, Inst Trop Biosci & Biotechnol, Xueyuan Rd 4, Haikou 571101, Peoples R China
关键词： Chlorolobion braunii; chloroplast genome; phylogenetic analysis; terminal inverted repeat; >
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.5； 五年影响因子：0.6 ）
ISSN：
年卷期： 2023 年 8 卷 7 期
页码：
收录情况： SCI
摘要： Sphaeropleales is an order of fast-growing microalgae with high oil content and high efficiency in sewage treatment, in which photosynthesis plays a critical role. We isolated a strain of Sphaeropleales, Chlorolobion braunii ITBB-AG6 from an azolla community in a sewage pond, and sequenced its chloroplast genome. The complete genome has a length of 154 kb with a GC content of 31.7%. A total of 89 genes were annotated, including 56 protein-coding genes, 30 tRNA genes, and three rRNA genes. Out of the protein coding genes, 64.3% are involved in photosynthesis, 28.6% are involved in protein synthesis, and 7.1% are involved in ATP synthesis. Transfer RNA genes for 20 amino acids were identified, in which tRNA genes for methionine, leucine, and arginine are tripled, whereas tRNA genes for glutamic acid, glycine, serine, and threonine are doubled. Terminal inverted repeats of 27.9 kb containing 10 genes related to photosynthesis and chloroplast division are present in the genome, suggesting that photosynthesis was strengthened in the evolutionary history. Phylogenetic analysis indicates that C. braunii ITBB-AG6 falls in the family Selenastraceae and is most closely related to Monoraphidium neglectum.
- 相关文献
作者其他论文 更多>>
-
Extensive post-transcriptional regulation revealed by integrative transcriptome and proteome analyses in salicylic acid-induced flowering in duckweed (Lemna gibba)
作者：Fu, Lili;Tan, Deguan;Sun, Xuepiao;Ding, Zehong;Zhang, Jiaming;Fu, Lili;Tan, Deguan;Sun, Xuepiao;Ding, Zehong;Zhang, Jiaming;Ding, Zehong
关键词：flowering; Lemna gibba; proteome analysis; post-transcriptional regulation; salicylic acid; transcriptome analysis
-
Genome-wide identification and expression analysis of the SOD gene family under biotic and abiotic stresses in sweet orange
作者：Li, Xulin;Yin, Tuo;Chen, Chaoying;Yang, Xiuyao;Zi, Yinqiang;Zhao, Ke;Zhang, Hanyao;Wen, Ke;Zhu, Ling;Zhang, Jiaming
关键词：Sweet orange; SOD gene family; Abiotic stress; Biotic stress; Expression profile
-
Full-Length Transcriptome and the Identification of lncRNAs Involved in Salicylic Acid-Induced Flowering in Duckweed (Lemna gibba)
作者：Fu, Lili;Tan, Deguan;Sun, Xuepiao;Ding, Zehong;Zhang, Jiaming;Fu, Lili;Tan, Deguan;Sun, Xuepiao;Ding, Zehong;Zhang, Jiaming;Ding, Zehong
关键词：salicylic acid; flowering; long noncoding RNAs; transcriptome analysis; Lemna gibba
-
Metabolic GWAS-based dissection of genetic basis underlying nutrient quality variation and domestication of cassava storage root
作者：Ding, Zehong;Fu, Lili;Yan, Yan;Li, Meiying;Tie, Weiwei;Ye, Xiaoxue;Yang, Jinghao;Xie, Zhengnan;Wang, Yu;Guo, Jianchun;Zhang, Jiaming;Peng, Ming;Hu, Wei;Wang, Bin;Ye, Jianqiu;Ou, Wenjun;Chen, Songbi;Xiao, Xinhui;Wan, Zhongqing;An, Feifei;Li, Kaimian;Yan, Yan;Li, Meiying;Tie, Weiwei;Ye, Xiaoxue;Yang, Jinghao;Xie, Zhengnan;Wang, Yu;Guo, Jianchun;Zhang, Jiaming;Peng, Ming;Zeng, Liwang;Tie, Weiwei;Ye, Xiaoxue;Wang, Yu;Peng, Ming;Luo, Jie;Zeng, Liwang;Dong, Xuekui;Luo, Jie
关键词：Cassava; Metabolic profiling; Genome-wide association study; Natural variation; Nutrient quality; Domestication
-
Natural Products and Biological Activity from Actinomycetes Associated with Marine Algae
作者：Xiong, Zijun;Zhang, Shiqing;Ma, Shuai;Guo, Zhikai;Xiong, Zijun;Zhang, Shiqing;Ma, Shuai;Guo, Zhikai;Wang, Rong;Xia, Tengfei
关键词：actinomycetes; marine algae; secondary metabolite; bioactive compound
-
Genome characterization based on the Spike-614 and NS8-84 loci of SARS-CoV-2 reveals two major possible onsets of the COVID-19 pandemic
作者：Hu, Xiaowen;Mu, Yaojia;Deng, Ruru;Zhang, Jiaming;Hu, Xiaowen;Yi, Guohui;Yao, Lei;Yao, Lei
关键词：
-
Characterization of the mitochondrial genome of Chlorolobion braunii ITBB-AG6, an azolla-associated green alga isolated from sanitary sewage
作者：He, Yiliang;Yang, Qiaoqiao;Lai, Huanggui;Ma, Shuai;Zhang, Jiaming;Lai, Huanggui;Zhang, Jiaming
关键词：Chlorolobion braunii; mitochondrial genome; phylogenetic analysis; organelle genome; >
