DNA Barcoding Revealing the Parrotfish (Perciformes: Scaridae) Diversity of the Coral Reef Ecosystem of the South China Sea
文献类型: 外文期刊
作者: Xiao, Yayuan 1 ; Li, Chunhou 1 ; Wang, Teng 1 ; Lin, Lin 1 ; Guo, Jiatong 1 ; Quan, Qiumei 1 ; Liu, Yong 1 ;
作者机构: 1.Chinese Acad Fishery Sci, South China Sea Fisheries Res Inst, Key Lab South China Sea Fishery Resources Exploit, Minist Agr & Rural Affairs, Guangzhou 510300, Peoples R China
2.Sanya Trop Fisheries Res Inst, Key Lab Efficient Utilizat & Proc Marine Fishery, Sanya 572018, Peoples R China
3.Sci Observat & Res Stn Pearl River Estuary Ecosys, Guangzhou 510300, Peoples R China
4.Guangdong Prov Key Lab Fishery Ecol Environm, Guangzhou 510300, Peoples R China
关键词: parrotfish; DNA barcoding; COI; the South China Sea; coral reef
期刊名称:SUSTAINABILITY ( 影响因子:3.889; 五年影响因子:4.089 )
ISSN:
年卷期: 2022 年 14 卷 22 期
页码:
收录情况: SCI
摘要: Parrotfish are an important group in the coral reef ecosystem that maintain ecological stability and have a close relationship with coral reefs. Around the world, parrotfish and coral reefs are being destroyed due to human activities and global climate change. Here, we investigated the diversity of parrotfish in the South China Sea (SCS) using DNA barcoding, and initially established a DNA barcode database of the SCS parrotfish. A total of 1620 parrotfish specimens, belonging to 23 species of 6 genera in the family Scaridae, were collected in the SCS, accounting for 64% of the parrotfish species in the SCS. Genetic distance analysis at each taxonomic level showed that the average genetic distance was 0.23% within species, 8.52% within genus and 13.89% within family. The average inter-specific distance was 37.04-fold the intra-specific distance. Barcode gap analysis showed that 6 of the 21 parrotfish species with multiple samples had no barcode gap, resulting in an overall identification success rate of 74%. The ABGD analysis revealed that there could be 37 potential operational taxonomic units (OTUs) and the BIN analysis showed 32 identifiable taxonomic units, which by far exceed the number of morphologically previously known species. Overall, this study complements the lack of parrotfish DNA barcode sequences, and our findings provide an important stepping-stone to further study the diversity of parrotfish in South China.
- 相关文献
作者其他论文 更多>>
-
How fish intestinal cells responded to dietary methylmercury exposure? A single-cell transcriptomic analysis☆
作者:Yin, Bingxin;Wang, Xun;Fang, Junhao;Yin, Bingxin;Wang, Wen-Xiong;Liu, Yong
关键词:Methylmercury; Intestinal cells; Heterogeneous responses; ScRNA-seq; Sparus aurata
-
Spatial-temporal distribution of phytoplankton HAB species and contamination status of oyster toxins under intensive oyster farming in Jiangmen coasts, the South China Sea
作者:Zou, Jian;Xiao, Yayuan;Su, Jiaqi;Wu, Peng;Wang, Teng;Lin, Lin;Li, Chunhou;Liu, Yu;Liu, Yong;Zou, Jian;Xiao, Yayuan;Wu, Peng;Wang, Teng;Liu, Yong;Liu, Yang;Wang, Teng;Liu, Yu;Liu, Yong
关键词:HAB species of phytoplankton; Alexandrium pacificum; Paralytic shellfish poisoning; Diarrhetic shellfish poisoning; Jiangmen oyster farming area
-
Changes in Seasonal Spatial Distribution Patterns of Euprymna berryi and Euprymna morsei: The Current and Predictions Under Climate Change Scenarios
作者:Xu, Min;Liu, Yong;Song, Xiaojing;Yang, Linlin;Xu, Min;Liu, Yong;Song, Xiaojing;Yang, Linlin
关键词:ecological succession; Sepiolid; paralarvae; T-S diagram; nekton community; nursery; spawn; Yellow Sea; bobtail squid
-
Elucidating roles of lipid remodeling and ion homeostasis in sustaining oyster allometric growth
作者:He, Guixiang;Xu, Yang;Deng, Yuewen;Zhao, Liqiang;Yao, Tuo;Liu, Yong;Zhao, Liqiang;Zhao, Liqiang;Yao, Tuo;Yao, Tuo
关键词:Bivalves; Tissue allometry; Lipidome profiling; Transcriptome reshuffling
-
Gut microbiota and metabolic functions in herbivorous fish from Xisha coral reefs, China
作者:Yang, Xiyue;Shi, Xiaojun;Li, Tuanjie;Xiong, Xiaofei;Wu, Peng;Yang, Xiyue;Wang, Teng;Lin, Lin;Liu, Yu;Zou, Jian;Li, Chunhou;Liu, Yong;Wu, Peng;Yang, Xiyue;Xiao, Yayuan;Wang, Teng;Lin, Lin;Zou, Jian;Liu, Yong;Wu, Peng;Shi, Xiaojun;Li, Tuanjie;Xiong, Xiaofei;Liu, Yu;Liu, Yong
关键词:Herbivorous fish; Carnivorous fish; Macroalgae; Gut microbiota; Metabolic functional genes
-
Unraveling Fish Community Diversity and Structure in the Yellow Sea: Evidence from Environmental DNA Metabarcoding and Bottom Trawling
作者:Zhang, Jinyong;Liu, Yuan;Ye, Jinqing;Li, Hongjun;Cui, Xiaoyu;Lin, Lin;Zhang, Weiyue
关键词:eDNA metabarcoding; fish community; diversity; bottom trawling; Yellow Sea
-
An Over 30-Year Analysis of Heavy Metal Deposition in Daya Bay Sediments
作者:Hu, Min-Jie;Wang, Xun;Xiao, Yayuan;Xiao, Yayuan;Zhang, Li
关键词:Heavy Metals; Sediment; Historical Patterns; Vertical Distribution; Sources



