1GrTEdb: the first web-based database of transposable elements in cotton (Gossypium raimondii)

作者： Zhenzhen Xu; Jing Liu; Du, Jianchang; Shen, Xinlian; Wanchao Ni; Zhen Peng; Yue Guo; Wuwei Ye; Fang Huang; Xianggui Zhang; Peng Xu; Qi Guo; Xinlian Shen; Jianchang Du; SCI

机构： Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China; Provincial Key Laboratory of Agrobiology, The Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China; Jiangsu Acad Agr Sci, Inst Biotechnol, Prov Key Lab Agrobiol, Nanjing 210014, Peoples R China; ;Jiangsu Acad Agr Sci, Inst Ind Crops, Key Lab Cotton & Rapeseed Nanjing, Nanjing 210014, Peoples R China; State Key Laboratory of Cotton Biology, The Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China;

来源：DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION

年份：2017

2Identification of Quantitative Trait Loci for Fiber Quality Properties on Homoeologous Chromosomes 13 and 18 of Gossypium klotzschianum

作者： Shen, Xinlian; SCI

机构： Minist Agr, Key Lab Cotton & Rapeseed Nanjing, Nanjing, Jiangsu, Peoples R China; Jiangsu Acad Agr Sci, Inst Ind Crops, Nanjing 210014, Peoples R China;

来源：CROP SCIENCE

年份：2014

3Fine mapping and identification of candidate genes for a QTL affecting Meloidogyne incognita reproduction in Upland cotton

作者： Kumar, Pawan; He, Yajun; Singh, Rippy; Shen, Xinlian; Chee, Peng W.; Davis, Richard F.; Guo, Hui; Paterson, Andrew H.; Peterson, Daniel G.; Nichols, Robert L.; Shen, Xinlian; He, Yajun; SCI

机构： Univ Georgia, Cotton Mol Breeding Lab, Tifton, GA 31793 USA; USDA ARS, Crop Protect & Management Res Unit, Tifton, GA 31793 USA; Univ Georgia, Plant Genome Mapping Lab, Athens, GA 30602 USA; Mississippi State Univ, Inst Genom Biocomp & Biotechnol, Mississippi State, MS 39762 USA; Cotton Inc, 6399 Weston Pkwy, Cary, NC 27513 USA; Jiangsu Acad Agr Sci, Inst Biotechnol, Nanjing 210014, Jiangsu, Peoples R China; Southwest Univ, Coll Agron & Biotechnol, Chongqing 400716, Peoples R China;

来源：BMC GENOMICS

关键词： Cotton Root Knot Nematodes RKN QTLs SNP Candidate genes

年份：2016

4Transcriptome-Wide Identification of Salt-Responsive Members of the WRKY Gene Family in Gossypium aridum

作者： Fan, Xinqi; Fan, Xinqi; Guo, Qi; Xu, Peng; Gong, YuanYong; Shu, Hongmei; Yang, Yang; Ni, Wanchao; Zhang, Xianggui; Shen, Xinlian; Fan, Xinqi; Guo, Qi; Xu, Peng; Gong, YuanYong; Shu, Hongmei; Yang, Yang; Ni, Wanchao; Zhang, Xianggui; Shen, Xinlian; SCI

机构： Nanjing Agr Univ, State Key Lab Crop Genet & Germplasm Enhancement, Nanjing, Jiangsu, Peoples R China; Minist Agr, Key Lab Cotton & Rapeseed Nanjing, Nanjing, Jiangsu, Peoples R China; Jiangsu Acad Agr Sci, Inst Ind Crops, Nanjing, Jiangsu, Peoples R China; Jiangsu Acad Agr Sci, Inst Ind Crops,;

来源：PLOS ONE

年份：2015

5Transcription Factor GarWRKY5 Is Involved in Salt Stress Response in Diploid Cotton Species (Gossypium aridum L.)

作者： Guo, Qi; Zhao, Liang; Fan, Xinqi; Xu, Peng; Xu, Zhenzhen; Zhang, Xianggui; Meng, Shan; Shen, Xinlian; Guo, Qi; Zhao, Liang; Fan, Xinqi; Xu, Peng; Xu, Zhenzhen; Zhang, Xianggui; Meng, Shan; Shen, Xinlian; Shen, Xinlian; SCI

机构： Minist Agr & Rural Affairs, Key Lab Cotton & Canola Res Lower Reach Yangtze R, Nanjing 210014, Jiangsu, Peoples R China; Jiangsu Acad Agr Sci, Inst Ind Crops, Nanjing 210014, Jiangsu, Peoples R China; Jiangsu Univ, Inst Life Sci, Zhenjiang 212013, Jiangsu, Peoples R China;

来源：INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

关键词： expression patterns; Gossypium aridum; RNA-Seq; salt stress; virus-induced gene silencing (VIGS); WRKY

年份：2019

6Overexpression of a samphire high-affinity potassium transporter gene SbHKT1 enhances salt tolerance in transgenic cotton

作者： Guo, Qi; Meng, Shan; Tao, Shucui; Feng, Juan; Fan, Xinqi; Xu, Peng; Xu, Zhenzhen; Shen, Xinlian; SCI

机构： JAAS, Inst Ind Crops, Minist Agr & Rural Affairs, Key Lab Cotton & Rapeseed Nanjing, Nanjing 210014, Peoples R China;

来源：ACTA PHYSIOLOGIAE PLANTARUM

关键词： Cotton; Overexpression; Salt stress; SbHKT1

年份：2020

7Genetic Evaluation of Exotic Chromatins from Two Obsolete Interspecific Introgression Lines of Upland Cotton for Fiber Quality Improvement

作者： Kumar, Pawan; Singh, Rippy; Lubbers, Edward L.; Shen, Xinlian; Chee, Peng W.; Kumar, Pawan; Shen, Xinlian; Paterson, Andrew H.; Campbell, B. Todd; Jones, Donald C.; SCI

机构： Univ Georgia, Cotton Mol Breeding Lab, Tifton, GA 31793 USA; USDA ARS, Crop Improvement & Protect Res Unit, Salinas, CA 93905 USA; Jiangsu Acad Agr Sci, Biotechnol Inst, Nanjing 210014, Jiangsu, Peoples R China; Univ Georgia, Plant Genome Mapping Lab, Athens, GA 30606 USA; USDA ARS, Coastal Plains Soil Water & Plant Res Ctr, 2611 W Lucas St, Florence, SC 29501 USA; Cotton Inc, 6399 Weston Pkwy, Cary, NC 27513 USA;

来源：CROP SCIENCE

年份：2019

8Genome sequence of Gossypium anomalum facilitates interspecific introgression breeding

作者： Xu, Zhenzhen; Meng, Shan; Xu, Peng; Zhai, Caijiao; Huang, Fang; Guo, Qi; Zhao, Liang; Shangguan, Yixin; Zhang, Xianggui; Zhao, Jun; Xu, Jianwen; Liu, Jianguang; Gao, Jin; Ni, Wanchao; Chen, Xianglong; Ji, Wei; Wang, Nanyi; Lu, Xiaoxi; Shen, Xinlian; Chen, Jiedan; Zhang, Tianzhen; Quan, Yonggang; Wen, Tian; Wang, Shihong; Meng, Zhuang; Zhang, Ya; Ji, Wei; Lu, Xiaoxi; Wang, Kai; SCI

机构： Jiangsu Acad Agr Sci, Key Lab Cotton & Rapeseed Nanjing, Minist Agr & Rural Affairs, Inst Ind Crops, Nanjing, Peoples R China; Zhejiang Univ, Inst Crop Sci, Plant Precis Breeding Acad, Zhejiang Prov Key Lab Crop Genet Resources,Coll Ag, Hangzhou, Peoples R China; JOIN HOPE SEEDS Co Ltd, Changji, Peoples R China; Fujian Agr & Forestry Univ, Key Lab Genet Breeding & Multiple Utilizat Crops M, Fuzhou, Peoples R China;

来源：PLANT COMMUNICATIONS

关键词： wild diploid species; Gossypium anomalum; genome; chromosome segment substitution lines; drought tolerance; fiber strength

年份：2022

9Transcriptomic profiling reveals salt-responsive long non-coding RNAs and their putative target genes for improving salt tolerance in upland cotton (Gossypium hirsutum)

作者： Feng, Wenxiang; Fang, Hui; Mehari, Teame Gereziher; Gu, Haijing; Wu, Ying; Jia, Mengxue; Han, Jinlei; Wang, Kai; Wang, Baohua; Guo, Lishuang; Li, Feng; Chen, Haodong; Guo, Qi; Xu, Zhenzhen; Shen, Xinlian; Ditta, Allah; Khan, Muhammad K. R.; SCI

机构： Nantong Univ, Sch Life Sci, Nantong 226019, Jiangsu, Peoples R China; Natl Hybrid Cotton Res Promot Ctr, Cotton Sci Res Inst Hunan, Changde 415101, Hunan, Peoples R China; Jiangsu Acad Agr Sci, Inst Ind Crops, Nanjing 210014, Jiangsu, Peoples R China; Nucl Inst Agr & Biol, Plant Breeding & Genet Div, Faisalabad 38000, Pakistan;

来源：INDUSTRIAL CROPS AND PRODUCTS

关键词： Gossypium hirsutum; Transcriptome; LncRNA; Salt stress; VIGS

年份：2024

10Characterization of centromeric DNA of Gossypium anomalum reveals sequence-independent enrichment dynamics of centromeric repeats

作者： Ding, Wenjie; Zhu, Yuanbin; Han, Jinlei; Zhang, Hui; Wang, Kai; Zhu, Yuanbin; Xu, Zhenzhen; Shen, Xinlian; Khurshid, Haris; Liu, Fang; Hasterok, Robert; SCI

机构： Nantong Univ, Sch Life Sci, Nantong 226019, Peoples R China; Fujian Agr & Forestry Univ, Coll Agr, Fuzhou 350002, Peoples R China; Jiangsu Acad Agr Sci, Inst Ind Crops, Key Lab Cotton & Rapeseed Nanjing, Minist Agr & Rural Affairs, Nanjing 210014, Peoples R China; Natl Agr Res Ctr, Oilseeds Res Program, Islamabad 44500, Pakistan; Chinese Acad Agr Sci, Inst Cotton Res, State Key Lab Cotton Biol, Anyang 455000, Peoples R China; Univ Silesiaia Katowice, Inst Biol Biotechnol & Environm Protect, Fac Nat Sci, Plant Cytogenet & Mol Biol Grp, PL-40032 Katowice, Poland;

来源：CHROMOSOME RESEARCH

关键词： Centromere; Centromeric retrotransposon; Adaptive evolution; Chromatin immunoprecipitation; Gossypium anomalum; CENH3

年份：2023