Whole genome identification of CBF gene families and expression analysis in Vitis vinifera L.
文献类型: 外文期刊
第一作者: Fang, Xiang
作者: Fang, Xiang;Lin, Yiling;Chen, Chun;Pervaiz, Tariq;Luo, Hefei;Fang, Jinggui;Shangguan, Lingfei;Fang, Xiang;Lin, Yiling;Chen, Chun;Pervaiz, Tariq;Luo, Hefei;Fang, Jinggui;Shangguan, Lingfei;Wang, Xicheng
作者机构:
关键词: biotic and abiotic stresses; bud dormancy; CBF; fruit development; grape
期刊名称:CZECH JOURNAL OF GENETICS AND PLANT BREEDING ( 影响因子:0.9; 五年影响因子:1.2 )
ISSN: 1212-1975
年卷期: 2023 年 59 卷 3 期
页码:
收录情况: SCI
摘要: The CBF (C-repeat binding factors) genes play important roles in response to abiotic stress and environmental changes. In the present study, a total of 18 CBF genes were identified from a grapevine. Their domains, phylogenetics, and collinearity were analysed. The results revealed, that 18 VviCBF genes were distributed on 10 chromosomes unevenly in the grape genome. Promoter data analysis showed that the CBF gene has many cis-acting elements related to plant growth and development, light response, hormone, and abiotic stress response. We found that six VviCBF genes including, VviCBF5, VviCBF13, VviCBF14, VviCBF15, VviCBF16, and VviCBF18 differentially expressed during fruit developmental stages. Furthermore, four VviCBF genes including, VviCBF1, VviCBF3, VviCBF6, and VviCBF11 were expressed at the early stage of bud dormancy, whereas, nine VviCBF genes were expressed at the bud dormancy-breaking stage. Additionally, various VviCBFs genes respond to different abiotic and biotic stress. These findings will lay a foundation for further study of the CBF genes in bud dormancy, downy mildew, and abiotic and biotic stresses.
分类号:
- 相关文献
作者其他论文 更多>>
-
Two homoeoallelic gene expression of TaCHLIs ensures normal chlorophyll biosynthesis in Hexaploid wheat
作者:Zhao, Yankun;Ban, Jinfu;Li, Zhankun;Li, Caihua;Fu, Xiaoyi;Gao, Xinmei;Ding, Xin;He, Mingqi;Gao, Zhenxian;Yang, Jian;Zhang, Yu'e;Wang, Yan;Hu, Weiguo;Wang, Xicheng;Zhou, Yanjie;Cao, Tingjie;Zou, Yanmin;Yang, Junfeng;Zhang, Wensheng
关键词:Magnesium chelatase; Genetic complementarity; Hexaploid wheat; Homoeologs loss; Redundant mRNA dosage
-
OsSDG715, a Histone H3K9 Methyltransferase, Integrates Auxin and Cytokinin Signaling to Regulate Callus Formation in Rice
作者:Song, Wenjing;Cai, Hairong;Guo, Yuanyuan;Chen, Shiyi;Yao, Yingyun;Wang, Jiafeng;Guo, Tao;Chen, Chun;Zhang, Jian;Song, Wenjing;Cai, Hairong;Guo, Yuanyuan;Chen, Shiyi;Yao, Yingyun;Wang, Jiafeng;Guo, Tao;Chen, Chun
关键词:Rice; Callus formation;
OsSDG715 ; Auxin; Cytokinin -
Improvement of the accuracy of breeding value prediction for egg production traits in Muscovy duck using low-coverage whole-genome sequence data
作者:Ye, Haoqiang;Liu, Xiaoqi;Bello, Semiu Folaniyi;Guo, Lijin;Fang, Xiang;Lin, Duo;Mo, Yu;Lei, Zhilin;Cai, Bolin;Nie, Qinghua;Ye, Haoqiang;Liu, Xiaoqi;Bello, Semiu Folaniyi;Guo, Lijin;Fang, Xiang;Lin, Duo;Mo, Yu;Lei, Zhilin;Cai, Bolin;Nie, Qinghua;Ye, Haoqiang;Liu, Xiaoqi;Bello, Semiu Folaniyi;Guo, Lijin;Fang, Xiang;Lin, Duo;Mo, Yu;Lei, Zhilin;Cai, Bolin;Nie, Qinghua;Ji, Congliang;Bello, Semiu Folaniyi
关键词:Muscovy duck; Low-coverage whole genome sequencing; Genomic prediction; Egg production traits; Linkage disequilibrium
-
Transcriptomic profiling reveals a regulatory network governing volatile compound biosynthesis in Shine Muscat grapes (Vitis labruscana Baily x V. vinifera L.)
作者:Nong, Yongkang;Chen, Yanbei;Jia, Haifeng;Zhou, Sihong;Wang, Bo;Cheng, Guo;Cao, Xiongjun;Han, Jiayu;Bai, Xianjin;Bai, Yang;Huang, Xiaoyun;He, Jianjun;Pervaiz, Tariq
关键词:Two-crop-a-year; Shine Muscat (
Vitis labruscana Baily xV. vinifera L.); HS-SPME-GC-MS; Transcriptomic; Volatile compounds -
Genome-wide identification and expression pattern analysis of the dehydrin gene family in Eriobotrya japonica
作者:Zhang, Yanping;Zhao, Shuang;Ge, Mengqing;Wang, Pengkai;You, Weizhong;Zhang, Yanping;Zhao, Shuang;Wang, Pengkai;You, Weizhong;Zhu, Xudong;Pervaiz, Tariq
关键词:Loquat; Dehydrin; Bioinformatics; Adversity stress; Expression analysis
-
Gibberellin application and RNA-seq-based transcriptomtc analysis of leaf and buds in grape
作者:Cheng, Yuanxin;Zhou, Yunzhi;Ma, Zhiyuan;Tao, Zhen;Zhou, Sihong;Wang, Bo;Chen, Xueqin;Jia, Haifeng;He, Jianjun;Zhang, Ying;Pervaiz, Tariq
关键词:Grape; Gibberellin; RNA-seq; Buds; Leaves
-
Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages
作者:Sun, Jiaying;Li, Xuefeng;Chen, Chun;Huang, Yee;Xu, Xiangfei;Cui, Xuemei;Hao, Fangjiao;Ji, Quanan;Bao, Guolian;Liu, Yan
关键词:Pasteurella multocida; Outer membrane vesicles; Proteomics; Inflammatory response