Metagenomics study to compare the taxonomic composition and metabolism of a lignocellulolytic microbial consortium cultured in different carbon conditions
文献类型： 外文期刊
作者： Borjigin, Qinggeer 1 ; Zhang, Bizhou 3 ; Yu, Xiaofang 1 ; Gao, Julin 1 ; Zhang, Xin 1 ; Qu, Jiawei 1 ; Ma, Daling 1 ; Hu, Shuping 2 ; Han, Shengcai 2 ;
作者机构： 1.Inner Mongolia Agr Univ, Agr Coll, 275 XinJian East St, Hohhot 010019, Peoples R China
2.Key Lab Crop Cultivat & Genet Improvement Inner M, 275 XinJian East St, Hohhot 010019, Peoples R China
3.Inner Mongolia Acad Agr & Anim Husb Sci, Special Crops Inst, 22 ZhaoJun Rd, Hohhot 010031, Peoples R China
4.Inner Mongolia Agr Univ, Vocat & Tech Coll, Altan St, Baotou 014109, Peoples R China
5.Inner Mongolia Agr Univ, Hort & Plant Protect Coll, 29 Eerduosi East St, Hohhot 010019, Peoples R China
关键词： Functional potentials; Metagenomics; Microbial consortium; Taxonomic composition
期刊名称：WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY （ 影响因子：4.253； 五年影响因子：4.272 ）
ISSN： 0959-3993
年卷期： 2022 年 38 卷 5 期
页码：
收录情况： SCI
摘要： A lignocellulolytic microbial consortium holds promise for the in situ biodegradation of crop straw and the comprehensive and effective utilization of agricultural waste. In this study, we applied metagenomics technology to comprehensively explore the metabolic functional potential and taxonomic diversity of the microbial consortia CS (cultured on corn stover) and FP (cultured on filter paper). Analyses of the data on metagenomics taxonomic affiliations revealed considerable differences in the taxonomic composition and carbohydrate-active enzymes profile of the microbial consortia CS and FP. Pseudomonas, Dysgonomonas and Sphingobacterium in CS and Cellvibrio and Pseudomonas in FP had a much wider distribution of lignocellulose degradative ability. The genes for more lignocellulose degradative enzymes were detected when the relatively simple substrate filter paper was used as the carbon source. Clusters of Orthologous Groups (COG) and Kyoto Encyclopedia of Genes and Genomes (KEGG) annotation analyses revealed considerable levels of similarity, and carbohydrate metabolic and amino acid metabolic pathways were the most enriched in CS and FP, respectively. The mechanism used by the two microbial consortia to degrade lignocellulose was similar, but the annotation of quantity of genes indicated that they are diverse and vary greatly. These data underlie the interactions between microorganisms and the synergism of enzymes during the degradative process of lignocellulose under different substrates and suggest the development of potential microbial resources.
- 相关文献
作者其他论文 更多>>
-
Effect of Five Seed-Coating Agents on the Germination Rate and the Evaluation of Control Effect on the Damping-Off Disease of Sugar Beet
作者：Zhang, Bizhou;Sun, Mengyuan;Zheng, Wenzhe;Zhang, Hui;Fu, Zengjuan;Zhao, Shangmin;Zhang, Ziqiang;Wang, Liang;Yuanyuan, E.;Zhang, Huizhong;Bai, Chen;Lu, Chunxing;Zhang, Bizhou;Sun, Mengyuan;Zheng, Wenzhe;Zhang, Hui;Fu, Zengjuan;Zhao, Shangmin;Zhang, Ziqiang;Wang, Liang;Yuanyuan, E.;Zhang, Huizhong;Bai, Chen;Li, Xiaodong;Han, Pingan;Li, Xiaodong;Aidong, Chen
关键词：Sugar beet; Seed-coating agent; Germination rate; Beet damping-off disease
-
Association analysis of agronomic traits and construction of genetic networks by resequencing of 306 sugar beet (Beta vulgaris L.) lines
作者：Wang, Liang;Hasi, Agula;Wang, Liang;Zhang, Ziqiang;Han, Pingan;Liang, Yahui;Zhang, Huizhong;Fu, Zengjuan;Zhao, Shangmin;Yuanyuan, E.;Zhang, Hui;Wu, Xinrong;Zhang, Bizhou;Chang, Yue;Tang, Kuangang;Zheng, Wenzhe;Li, Xiaodong;Bai, Chen;Chen, Li;Wang, Ronghua;Gao, Weishi
关键词：
-
Integration of mRNA and miRNA analysis reveals the molecular mechanisms of sugar beet (Beta vulgaris L.) response to salt stress
作者：Zhang, Ziqiang;Wang, Liang;Chen, Wenjin;Fu, Zengjuan;Zhao, Shangmin;E, Yuanyuan;Zhang, Hui;Zhang, Bizhou;Sun, Mengyuan;Zhang, Huizhong;Zheng, Wenzhe;Han, Pingan;Chang, Yue;Tang, Kuangang;Li, Xiaodong;Gao, Yanyan
关键词：
-
Salt Stress Induces Complicated miRNA Responses of Sugar Beet (Beta vulgaris L.)
作者：Zhang, Ziqiang;Fu, Zengjuan;Chen, Wenjin;Wang, Liang;Zhao, Shangmin;Yuanyuan, E.;Zhang, Hui;Zhang, Bizhou;Sun, Mengyuan;Zheng, Wenzhe;Li, Xiaodong;Zhang, Huizhong;Dong, Jing;Zhang, Zhiqi;Ning, Zhihui
关键词：Sugar beet; Salt stress; microRNAs; Target gene
-
METAGENOMIC ANALYSIS OF MICROBIAL CONSORTIUM GF-20 IN CORN STOVER DEGRADATION AT LOW TEMPERATURE
作者：Zhang, Bi-zhou;Borjigin, Qinggeer;Gao, Ju-lin;Yu, Xiao-fang;Hu, Shu-ping;Wang, Fu-gui;Zhang, Xin;Han, Sheng-cai;Zhang, Bi-zhou;Borjigin, Qinggeer;Gao, Ju-lin;Yu, Xiao-fang;Hu, Shu-ping;Wang, Fu-gui;Zhang, Xin;Han, Sheng-cai;Zhang, Bi-zhou
关键词：metagenomic; microbial consortium; low temperature; corn stover degradation
-
Community succession and functional prediction of microbial consortium with straw degradation during subculture at low temperature
作者：Zhang, Xin;Borjigin, Qinggeer;Gao, Ju-Lin;Yu, Xiao-Fang;Zhang, Xin;Borjigin, Qinggeer;Gao, Ju-Lin;Yu, Xiao-Fang;Hu, Shu-Ping;Han, Sheng-Cai;Han, Sheng-Cai;Hu, Shu-Ping;Zhang, Bi-Zhou
关键词：
-
Genomic and transcriptomic-based analysis of agronomic traits in sugar beet (Beta vulgaris L.) pure line IMA1
作者：Li, Xiaodong;Liang, Yahui;Zhang, Huizhong;Wu, Xingrong;Zhang, Ziqiang;Wang, Liang;Han, Pingan;Zhang, Bizhou;Zheng, Wenzhe;He, Jiangfeng;Bai, Chen;He, Wenjin;Fang, Jingping;Chen, Duo;Xue, Ting;Liang, Yahui;Zhang, Huizhong;Wu, Xingrong;Zhang, Ziqiang;Wang, Liang;Han, Pingan;Zhang, Bizhou;Zheng, Wenzhe;He, Jiangfeng;Bai, Chen
关键词：Beta vulgaris; whole-gene sequencing; whole genome duplications (WGD); gene family; genome wide association study (GWAS); male sterility
