Molecular Evolution of Histone Methylation Modification Families in the Plant Kingdom and Their Genome-Wide Analysis in Barley
文献类型： 外文期刊
作者： An, Bingzhuang 1 ; Cai, Haiya 1 ; Li, Bo 2 ; Zhang, Shuo 1 ; He, Yonggang 1 ; Wang, Rong 2 ; Jiao, Chunhai 1 ; Guo, Ying 1 ; Xu, Le 2 ; Xu, Yanhao 1 ;
作者机构： 1.Hubei Acad Agr Sci, Key Lab Minist Agr & Rural Affairs Crop Mol Breedi, Hubei Key Lab Food Crop Germplasm & Genet Improvem, Food Crops Inst, Wuhan 430064, Peoples R China
2.Yangtze Univ, Coll Agr, Jingzhou 434025, Peoples R China
3.Hubei Acad Agr Sci, Minist Agr & Rural Affairs, Sci Observat & Expt Stn Crop Gene Resources & Germ, Wuhan 430064, Peoples R China
关键词： evolution; histone methylation; HMT; HDM; genome-wide analysis; barley
期刊名称：INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES （ 影响因子：5.6； 五年影响因子：6.2 ）
ISSN：
年卷期： 2023 年 24 卷 9 期
页码：
收录情况： SCI
摘要： In this study, based on the OneKP database and through comparative genetic analysis, we found that HMT and HDM may originate from Chromista and are highly conserved in green plants, and that during the evolution from algae to land plants, histone methylation modifications gradually became complex and diverse, which is more conducive to the adaptation of plants to complex and variable environments. We also characterized the number of members, genetic similarity, and phylogeny of HMT and HDM families in barley using the barley pangenome and the Tibetan Lasa Goumang genome. The results showed that HMT and HDM were highly conserved in the domestication of barley, but there were some differences in the Lasa Goumang SDG subfamily. Expression analysis showed that HvHMTs and HvHDMs were highly expressed in specific tissues and had complex expression patterns under multiple stress treatments. In summary, the amplification and variation of HMT and HDM facilitate plant adaptation to complex terrestrial environments, while they are highly conserved in barley and play an important role in barley growth and development with abiotic stresses. In brief, our findings provide a novel perspective on the origin and evolutionary history of plant HvHMTs and HvHDMs, and lay a foundation for further investigation of their functions in barley.
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