Differential expression of microRNAs of Litopenaeus vannamei in response to different virulence WSSV infection
文献类型： 外文期刊
作者： Sun, Xinying 1 ; Liu, Qing-hui 1 ; Yang, Bing 1 ; Huang, Jie 1 ;
作者机构： 1.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Minist Agr, Key Lab Sustainable Dev Marine Fisheries, Qingdao, Peoples R China
2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Fisheries & Aquaculture, Qingdao, Peoples R China
关键词： Litopenaeus vannamei; WSSV; Virulence; Differential expression; miRNAs
期刊名称：FISH & SHELLFISH IMMUNOLOGY （ 影响因子：4.581； 五年影响因子：4.851 ）
ISSN： 1050-4648
年卷期： 2016 年 58 卷
页码：
收录情况： SCI
摘要： WSSV is one of the most harmful pathogeny in the pacific white shrimp, and genetic variations caused the strains of different virulence. MicroRNAs (miRNAs) involved in the regulation of virus defense. To understand the different virulence of WSSV on miRNA expression in Litopeneaus vannamei, the deep sequencing was performed to compare two small RNA libraries prepared from hepatopancreas of Litopeneaus vannamei infected with normal-virulence or low-virulence WSSV. Approximately 29,398,623 raw reads from normal-virulence library and 35,291,803 raw reads from low-virulence library were obtained. There were about 37 miRNAs homologs identified. Sixteen miRNAs were significantly up regulated and twenty-one miRNAs were significantly down-regulated in normal-virulence infection library compared with low-virulence infection library. Of these, Igi-miR-1175-3p was the most significant different miRNA, followed by bmo-miR-1175-3p and ipu-miR-26b, respectively. The putative target genes for differentially expressed miRNAs were concerned with biological processes, signal meditated, cell differentiation and apoptosis, immune recognition and other more functions. The results will help to understand the miRNAs response to different virulence WSSV infection. (C) 2016 Elsevier Ltd. All rights reserved.
- 相关文献
作者其他论文 更多>>
-
The 2023 National Proficiency Test for molecular detection of shrimp infectious myonecrosis virus (IMNV) in China
作者：Li, Chen;Yang, Bing;Wang, Meifeng;Wan, Xiaoyuan;Li, Wenqiang;Song, Xiaoling;Liu, Li;Zhang, Qingli;Li, Chen;Yang, Bing;Wan, Xiaoyuan;Zhang, Qingli;Yu, Weizhong;Li, Qing;Wang, Meifeng;Li, Wenqiang
关键词：Proficiency test (PT); Infectious myonecrosis virus (IMNV); Z-score
-
Evaluation of the flinders technology associates cards for storage and molecular detection of Infectious hypodermal and hematopoietic necrosis virus (IHHNV) DNA
作者：Lian, Xin-Yu;Wang, Xiu-Hua;Li, Chen;Zhang, Qing-Li;Lu, Ruo-Xuan;Gou, Zi-Yue;Xu, Hua;Wang, Mei-Feng;Yang, Bing;Wang, Xiu-Hua;Zhang, Qing-Li;Yang, Bing;Lian, Xin-Yu;Wang, Xiu-Hua;Li, Chen;Zhang, Qing-Li;Lu, Ruo-Xuan;Gou, Zi-Yue;Xu, Hua;Wang, Mei-Feng;Yang, Bing;Jia, Peng
关键词：IHHNV; Flinders technology associates cards; Real-time PCR
-
Penaeus chinensis nearing a critical threshold of susceptibility to Decapod iridescent virus 1 (DIV1)
作者：Guo, Xiao-Meng;Wang, Guo-Hao;Xing, Jing-Yi;Qiu, Liang;Huang, Jie;Qiu, Liang;Huang, Jie;Yao, Jia-Yun;Guo, Xiao-Meng;Wang, Guo-Hao;Huang, Jie;Chen, Xiao-Ling;Xing, Jing-Yi
关键词：Decapod iridescent virus 1; Susceptible species; Penaeus chinensis; Non-invasive challenge mimicking nature; transmission pathway
-
Simultaneous detection of five shrimp pathogens using a single-tube EvaGreen real-time PCR assay with differential melting temperature
作者：Lou, Haoyu;Li, Xuan;Wang, Guohao;Zhang, Kaisong;Wang, Kejun;Huang, Jie;Dong, Xuan;Lou, Haoyu;Tang, Qiongying;Yang, Guoliang;Jia, Peng;Xiong, Jinbo
关键词：shrimp pathogens; EvaGreen; multiplex detection; melting temperature
-
A positive-sense single-stranded RNA virus acquired a negative-sense open reading frame through recombination
作者：Dong, Xuan;Zhang, Fan;Wang, Yiting;Li, Xuan;Zhou, Chengyan;Wang, Guohao;Huang, Jie;Dong, Xuan;Zhang, Fan;Wang, Yiting;Li, Xuan;Zhou, Chengyan;Wang, Guohao;Huang, Jie;Dong, Xuan;Zhang, Fan;Wang, Yiting;Li, Xuan;Zhou, Chengyan;Wang, Guohao;Huang, Jie;Li, Cixiu;Tian, Zhongshuai;Shi, Weifeng;Gao, Jing;Zhou, Hu;Sui, Liying;Nauwynck, Hans;Sorgeloos, Patrick;Holmes, Edward C.;Shi, Weifeng
关键词：
-
Infection with infectious precocious virus (IPV) suppresses infection with decapod iridescent virus 1 (DIV1) in Macrobrachium rosenbergii
作者：Lou, Haoyu;Tang, Qiongying;Yang, Guoliang;Lou, Haoyu;Wang, Guohao;Li, Xuan;Zhou, Chengyan;Guo, Xiaomeng;Wang, Liying;Dong, Xuan;Huang, Jie;Wang, Guohao;Zhou, Chengyan;Guo, Xiaomeng;Huang, Jie;Li, Xuan;Yang, Guoliang
关键词：Macrobrachium rosenbergii; Co-infection; DIV1; IPV
-
A TaqMan-MGB Probe Quantitative PCR Assay Detecting Hematodinium perezi
作者：Xie, Guosi;Wan, Xiaoyuan;Shi, Chengyin;Yang, Bing;Zhang, Qingli;Huang, Jie;Xie, Guosi;Wang, Hailiang;Wan, Xiaoyuan;Li, Meng;Shi, Chengyin;Yang, Bing;Zhang, Qingli;Li, Caiwen;Huang, Jie;Xie, Guosi;Zhu, Mengting;Bi, Jingnan;Yang, Liuxin;Wan, Xiaoyuan;Xie, Enpei;Shi, Chengyin;Yang, Bing;Zhang, Qingli;Huang, Jie;Li, Meng;Li, Caiwen
关键词：detection;
Hematodinium ; parasitic dinoflagellates; quantitation; TaqMan probe
