Genetic diversity of eight wild populations of Pampus argenteus along the coast of China inferred from fifteen polymorphic microsatellite markers
文献类型: 外文期刊
作者: Sun, Dandan 1 ; Ge, Yushuang 1 ; Cheng, Qiqun 1 ;
作者机构: 1.Chinese Acad Fishery Sci, East China Sea Fisheries Res Inst, Key Lab Ocean & Polar Fisheries, Minist Agr & Rural Affairs, Shanghai, Peoples R China
关键词: Pampus argenteus; microsatellite; genetic diversity; population structure
期刊名称:BRAZILIAN JOURNAL OF OCEANOGRAPHY ( 影响因子:1.048; 五年影响因子:1.319 )
ISSN: 1679-8759
年卷期: 2019 年 67 卷
页码:
收录情况: SCI
摘要: Pampus argenteus (Perciformes: Stromateidae) is widely distributed along the coast of China, Indian Ocean, Arabian Gulf and North Sea. Due to overfishing and environmental degradation, its resources reduced year after year. Thus, new management strategies are urgently needed for the sustainable growth and utilization of this species. Characterization of the genetic variation of this fish species is essential for conserving the genetic resource and restraining the population decline. Therefore, it is necessary to have a clear understanding of the intraspecific genetic diversity and population structure of the species. In this study, we assess the genetic diversity and population structure of P argenteus by using microsatellites. We genotyped 240 P argenteus individuals from eight wild populations collected from Shidao (SD), Lianyungang (LYG), Lvsi (LS), Zhoushan (ZS), Dongtou (DT), Xiapu (XP), Haikou (HK), and Beibuwan (BBW) along the coast of China using fifteen polymorphic microsatellites. A total of 139 alleles were determined at 15 loci across the eight populations, and a relatively high level of genetic diversity was observed, with observed heterozygosity (Ho) and expected heterozygosity (He) ranging from 0.100 to 1.000, and from 0.669 to 0.934 per locus-location combination, respectively. LS had the highest average allele (number of alleles, A=15.200), and HK the lowest (A=13.000). Hos of P. argenteus are less than Hes, indicating lack of heterozygote within populations. Analysis of molecular variance (AMOVA) showed that most variation (95.66%) occurred within populations, suggesting that this is the main source of total variance. This study will provide useful information for conservation and sustainable exploitation of this important fishery resource.
- 相关文献
作者其他论文 更多>>
-
Investigating skeletal deformities in Murray cod (Maccullochella peelii): a comprehensive study combining transcriptomics and histology
作者:Song, Dan;Peng, Di;Cheng, Qiqun;Song, Dan;Zhu, Xinpeng
关键词:Murray cod; RNA-seq; Differentially expressed genes; Transcriptome; Deformation
-
The complete mitogenome sequence and organization of Parachaeturichthys polynema (Gobiiformes: Gobiidae)
作者:Zhang, Hanye;Cheng, Qiqun;Cheng, Qiqun
关键词:Parachaeturichthys polynema; Gobiidae; phylogenetic analysis; mitochondrial genome
-
The complete mitochondrial genome sequence and phylogenetic position of Gobio coriparoides
作者:Ge, Yushuang;Ge, Yushuang;Cheng, Qiqun;Yan, Yongbin;Duan, Xiaochen;Wang, Tai;Zhang, Yanping;Lou, Zhongyu;Du, Yanyan
关键词:Gobio coriparoides; mitochondrial genome; phylogenetic analysis; molecular evolution; genetic structure
-
INTERTIDAL ZONATION OF THE SUMINOE OYSTER CRASSOSTREA ARIAKENSIS AND THE KUMAMOTO OYSTER CRASSOSTREA SIKAMEA ON THE COAST OF THE NORTHERN EAST CHINA SEA
作者:Wang, Taoni;Fan, Ruiliang;Sun, Zhaoyue;Li, Nannan;Li, Xueying;Quan, Weimin;Wang, Taoni;Sun, Zhaoyue;Cheng, Qiqun;Fan, Xiumei
关键词:oyster; Crassostrea sikamea; Crassostrea ariakensis; exposure; larvae; molecular; stressor; China
-
The complete mitochondrial genome and phylogenetic relationship of Trichiurus sp. from Jiangsu
作者:Fan, Huimin;Peng, Kaisong;Fan, Huimin;Cheng, Qiqun
关键词:Trichiuridae; Trichiurus; mitochondrial genome; molecular taxonomy; phylogenetic relationship; genome characteristics
-
Genetic diversity and population structure of small yellow croaker (Larimichthys polyactis) in the Yellow and East China seas based on microsatellites
作者:Cheng, Qiqun;Chen, Wenming;Ma, Li
关键词:Small yellow croaker; Larimichthys polyactis; Microsatellite; Genetic diversity; Population structure
-
The complete mitochondrial genome of Rhynchocypris oxycephalus (Teleostei: Cyprinidae) and its phylogenetic implications
作者:Zhang, Zhichao;Cheng, Qiqun;Ge, Yushuang;Zhang, Zhichao;Ge, Yushuang
关键词:conservation genetics; DNA barcoding; mitochondrial genome; phylogenetic analysis; Rhynchocypris oxycephalus