文献类型： 外文期刊
作者： Zhao, Hongchang 1 ; Zhou, Hao 3 ; Sun, Guobo 1 ; Dong, Biao 1 ; Zhu, Wenqi 3 ; Mu, Xiaohui 1 ; Li, Xiaoming 1 ; Wang, Jun 1 ; Zhao, Mengli 1 ; Yang, Wenhao 3 ; Zhang, Gansheng 1 ; Ji, Rongchao 2 ; Geng, Tuoyu 6 ; Gong, Daoqing 6 ; Meng, He 3 ; Wang, Jian 1 ;
作者机构： 1.Jiangsu Agrianim Husb Vocat Coll, Taizhou 225300, Peoples R China
2.Natl Waterfowl Gene Pool, Taizhou 225511, Peoples R China
3.Shanghai Jiao Tong Univ, Sch Agr & Biol, Key Lab Vet Biotechnol, Shanghai 201100, Peoples R China
4.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Peoples R China
5.Taizhou Fengda Agr & Anim Husb Technol Co Ltd, Taizhou 225511, Peoples R China
6.Yangzhou Univ, Coll Anim Sci & Technol, Yangzhou 225000, Peoples R China
期刊名称：SCIENTIFIC DATA （ 影响因子：5.8； 五年影响因子：8.9 ）
ISSN：
年卷期： 2024 年 11 卷 1 期
页码：
收录情况： SCI
摘要： Our study presents the assembly of a high-quality Taihu goose genome at the Telomere-to-Telomere (T2T) level. By employing advanced sequencing technologies, including Pacific Biosciences HiFi reads, Oxford Nanopore long reads, Illumina short reads, and chromatin conformation capture (Hi-C), we achieved an exceptional assembly. The T2T assembly encompasses a total length of 1,197,991,206 bp, with contigs N50 reaching 33,928,929 bp and scaffold N50 attaining 81,007,908 bp. It consists of 73 scaffolds, including 38 autosomes and one pair of Z/W sex chromosomes. Importantly, 33 autosomes were assembled without any gap, resulting in a contiguous representation. Furthermore, gene annotation efforts identified 34,898 genes, including 436,162 RNA transcripts, encompassing 806,158 exons, 743,910 introns, 651,148 coding sequences (CDS), and 135,622 untranslated regions (UTR). The T2T-level chromosome-scale goose genome assembly provides a vital foundation for future genetic improvement and understanding the genetic mechanisms underlying important traits in geese.
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