Transcriptome sequencing revealed the regulation of stem internode length associated with mechanical harvesting in three tea varieties
文献类型: 外文期刊
作者: Mi, Xiaozeng 1 ; Qiao, Dahe 1 ; Yang, Chun 1 ; Chen, Juan 1 ; Liang, Sihui 1 ; Guo, Yan 1 ;
作者机构: 1.Tea Res Inst, Guizhou Acad Agr Sci, Guiyang, Guizhou, Peoples R China
2.Guizhou Acad Agr Sci, Guizhou Key Lab Mol Breeding Characterist Hort Cro, Guiyang, Guizhou, Peoples R China
3.Guizhou Acad Agr Sci, Key Lab Crop Genet Resources & Germplasm Innovat K, Minist Agr & Rural Affairs, Guiyang 550006, Guizhou, Peoples R China
关键词: stem internode length; mechanical harvesting; tea plant; RNA-Seq; WGCNA
期刊名称:FRONTIERS IN PLANT SCIENCE ( 影响因子:4.8; 五年影响因子:5.7 )
ISSN: 1664-462X
年卷期: 2025 年 16 卷
页码:
收录情况: SCI
摘要: Introduction Internode length of tea plant is one of the key traits affecting the mechanical harvesting effect, but there are relatively few reports on their molecular regulatory.Methods Transcriptome sequencing (RNA-seq) was performed on it in order to explain its molecular mechanism. GO, KEGG enrichment and WGCNA were used to identify key genes, and their expression levels in three tea tree varieties were validated by qRT-PCR.Result In this study, we measured the internode lengths of the three varieties and found that their internode lengths were 'Feiyun' > 'Qiancha 1' > 'Longjing 43'. 10,518 differentially expressed genes were identified through transcriptome sequencing and analysis. GO and KEGG enrichment showed that these differentially expressed genes were mainly enriched in plant hormone signal transduction and DNA-binding transcription factor activity pathways. WGCNA analysis identified two modules significantly correlated with internode length. Combining enrichment analysis with WGCNA results, 28 candidate genes associated with internode length were identified. In addition, it was found that the expression levels of DELLA and GA3ox were highly expressed in 'Longjing 43', while GA2ox, WRKY, and ERF were highly expressed in 'Feiyun', showing significant positive and negative correlations with internode length, respectively.Discussion Our results provide candidate genes for studying the molecular mechanism of stem elongation, and provide a theoretical basis for selection machine harvested tea varieties and improvement of mechanical harvesting efficiency.
- 相关文献
作者其他论文 更多>>
-
CsMPDB 1.0: An interactive web application for visualizing and exploring the microRNAs and phasiRNAs of tea plant ( Camellia sinensis var. sinensis 'Shuchazao')
作者:Zhao, Shiqi;Zhang, Runqi;An, Yanlin;Jing, Tingting;Qiao, Dahe
关键词:MicroRNA; PhasiRNA; Database; Tea plant; ShinyApp
-
A defensive pathway from NAC and TCP transcription factors activates a BAHD acyltransferase for (Z)-3-hexenyl acetate biosynthesis to resist herbivore in tea plant (Camellia sinensis)
作者:Gu, Honglian;Li, Jiaxing;Qiao, Dahe;Li, Mei;Yao, Yingjie;Xie, Hui;Huang, Ke-lin;Liu, Shengrui;Wei, Chaoling;Zhu, Junyan;Qiao, Dahe;Xie, De-Yu
关键词:(Z)-3-hexenyl acetate;
CsCHAT1 ; herbivore; herbivore-induced plant volatiles; NAC transcription factor; TCP transcription factor; tea plants -
A comprehensive study of the physiology and chemistry of tea withering based on untargeted metabolomic, transcriptomic, and biochemical analyses
作者:Li, Yan;Chen, Yao;Pan, Ke;Mi, Xiaozeng;Qiao, Dahe;Chen, Juan;Chen, Zhengwu;Shen, Qiang;Zhang, Xiaoqin;Dai, Xinlong
关键词:Tea flavor; Withering; Transcriptomics; Metabolomics; Biochemical analysis
-
Analysis of thaumatin-like protein (TLP) gene family in tea plant revealed that CsTLP8 contributes to tea blister blight resistance
作者:Mi, Xiaozeng;Tang, Mengsha;Yang, Chun;Liang, Sihui;Chen, Yao;Qiao, Dahe;Chen, Zhengwu;Mi, Xiaozeng;Yang, Chun;Liang, Sihui;Chen, Zhengwu;Qiao, Dahe
关键词:Thaumatin-like protein; Gene family; Tea blister blight; Tea plant
-
Alternative splicing regulates tea aroma quality formation during withering of fresh leaves
作者:Qiao, Dahe;Mi, Xiaozeng;Qiao, Dahe;Mi, Xiaozeng;Xie, Hui;Zhu, Junyan;Liu, Shengrui;Wei, Chaoling
关键词:Camellia sinensis; Alternative splicing; Aroma; Withering; Transcriptome
-
Genome-wide identification of tea plant (Camellia sinensis) BAHD acyltransferases reveals their role in response to herbivorous pests
作者:Qiao, Dahe;Yang, Chun;Mi, Xiaozeng;Tang, Mengsha;Liang, Sihui;Chen, Zhengwu;Qiao, Dahe
关键词:Camellia sinensis; Acyltransferase; Tea geometrid; Tea green leafhopper; HIPVs
-
Widely targeted metabolomics and SPME-GC-MS analysis revealed the quality characteristics of non-volatile/volatile compounds in Zheng'an Bai tea
作者:Liu, Li;Yu, Shirui;An, Yanlin;Qiao, Dahe;Mi, Xiaozeng;Jing, Tingting
关键词:Zheng'an Bai tea; widely targeted metabolomics; non-volatile/volatiles; fresh leaves; tea processing; SPME-GC-MS



