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Discovery, phylogeny and expression patterns of AP2-like genes in maize

文献类型： 外文期刊

作者： Zhuang, Jing 1 ; Deng, De-Xiang 2 ; Yao, Quan-Hong 1 ; Zhang, Jian 3 ; Xiong, Fei 2 ; Chen, Jian-Min 2 ; Xiong, Ai-She 1 ;

作者机构： 1.Shanghai Acad Agr Sci, Shanghai 201106, Peoples R China

2.Yangzhou Univ, Yangzhou 225009, Peoples R China

3.Alberta Res Council, Vegreville, AB T9C 1T4, Canada

关键词： AP2/ERF;Arabidopsis thaliana;Expression profile;Maize;Transcription factor

期刊名称：PLANT GROWTH REGULATION （ 影响因子：3.412； 五年影响因子：3.691 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： A transcription factor (TF) is a protein that binds to specific DNA sequences and thereby controls transcription. A large number of TFs are found in plants. The AP2/ERF family of TFs contain the AP2 DNA-binding domain, which play important roles in transcriptional regulation in plant life. To understand the AP2/ERF family TFs of maize, the discovery, phylogeny and expression pattern analysis of AP2-like genes from maize were described. A total of 167 AP2-like genes were identified by in silico cloning using the amino acid sequence of AP2/ERF family TFs from Arabidopsis thaliana as the probe. The maize AP2-like genes identified were orthologous to those TFs in Arabidopsis. The AP2/ERF TFs from maize were classified into four subfamilies (DREB, ERF, AP2 and RAV) and a Soloist. Using the EST information of maize as a source of expression data, those AP2-like genes from maize were detected in different plant tissues.

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[1]Discovery and expression profile analysis of AP2/ERF family genes from Triticum aestivum. Zhuang, Jing,Yao, Quan-Hong,Sun, Chao-Cai,Zhou, Xi-Rong,Xiong, Ai-Sheng,Zhuang, Jing,Zhang, Jian,Chen, Jian-Min,Xiong, Fei.

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[18]Analysis of gene expression profile of Arabidopsis genes under trichloroethylene stresses with the use of a full-length cDNA microarray. Zhu, Bo,Peng, Ri-He,Xiong, Ai-Sheng,Fu, Xiao-Yan,Zhao, Wei,Tian, Yong-Sheng,Jin, Xiao-Fen,Xue, Yong,Xu, Jing,Han, Hong-Juan,Chen, Chen,Gao, Jian-Jie,Yao, Quan-Hong.

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