您好，欢迎访问中国热带农业科学院 机构知识库！
中国热带农业科学院机构知识库

全部

  • 全部
  • 标题
  • 学者
  • 机构
  • 关键词

Constructing a Genetic Linkage Map Using an F-1 Population of Non-inbred Parents in Cassava (Manihot esculenta Crantz)

文献类型： 外文期刊

作者： Chen, Xin 1 ; Xia, Zhiqiang 1 ; Fu, Yuhua 1 ; Lu, Cheng 1 ; Wang, Wenquan 1 ;

作者机构： 1.Chinese Acad Trop Agr Sci, Inst Trop Biosci & Biotechnol, Haikou 571101, Peoples R China

关键词： SSR;expressed sequence tag: EST;genome;species population;genetic linkage map;non-inbred parent

期刊名称：PLANT MOLECULAR BIOLOGY REPORTER （ 影响因子：1.595； 五年影响因子：2.042 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： A genetic linkage map of cassava has been generated with total of 355 molecular markers, 231 amplified fragment length polymorphisms (AFLPs), 41 simple sequence repeats (SSRs), 48 sequence-related amplified polymorphisms (SRAPs), and 35 expressed sequence tag (EST)-SSRs segregating from an F-1 population of an intraspecific cross between SC6, as female parent, and Mianbao, as male parent. The genetic map consisted of 18 linkage groups and spanned a 1,707.9 cM genetic distance, with the average marker interval being 4.81 cM. Thirty-five EST-SSR markers that were developed by our laboratory were mapped onto this map. The genetic map generated in this study will enrich the information of structural genomics in cassava, facilitating to identify quantitative trait loci (QTL) of interest and to serve as a useful complement for construction of an integrated map in the future.

  • 相关文献

[1]Mining EST-Derived SSR Markers to Assess Genetic Diversity in Cassava (Manihot esculenta Crantz). Zou, Meiling,Xia, Zhiqiang,Zhang, Yang,Chen, Xin,Bo, Weiping,Wang, Wenquan,Ling, Peng,Wei, Zusheng,Zou, Meiling,Xia, Zhiqiang,Zhang, Yang,Bo, Weiping.

[2]Genetic linkage map of Cucurbita maxima with molecular and morphological markers. Ge, Y.,Li, X.,Yang, X. X.,Cui, C. S.,Qu, S. P.,Ge, Y.. 2015

[3]Generation and characterisation of Tn5-tagged Xanthomonas oryzae pv. oryzae mutants that overcome Xa23-mediated resistance to bacterial blight of rice. Wang, Chun-Lian,Xu, An-Bi,Gao, Ying,Fan, Ying-Lun,Liang, Yun-Tao,Zheng, Chong-Ke,Sun, Liang-Qing,Zhao, Kai-Jun,Xu, An-Bi,Wang, Wen-Quan.

[4]Complete genome of Hainan papaya ringspot virus using small RNA deep sequencing. Zhang, Yuliang,Yu, Naitong,Huang, Qixing,Guo, Anping,Liu, Zhixin,Yin, Guohua,Wang, Xiangfeng,Xiong, Zhongguo,Wang, Xiangfeng,Xiong, Zhongguo.

[5]Uniqueness of the Gossypium mustelinum Genome Revealed by GISH and 45S rDNA FISH. Wu, Qiong,Liu, Fang,Li, Shaohui,Song, Guoli,Wang, Chunying,Zhang, Xiangdi,Wang, Yuhong,Wang, Kunbo,Wu, Qiong,Stelly, David. 2013

[6]Cloning and sequence analysis of two banana bunchy top virus genomes in Hainan. Zhang, Yu-Liang,Feng, Tuan-Cheng,Wang, Jian-Hua,Liu, Zhi-Xin,Yu, Nai-Tong,Yang, Wen-Jun,Lin, Zhan-Song,Kulye, Mahesh,Xiong, Zhongguo,Xiong, Zhongguo. 2012

[7]The genome draft of coconut (Cocos nucifera). Xiao, Yong,Fan, Haikuo,Xia, Wei,Zhou, Lixia,Li, Jing,Wu, Yi,Yang, Yaodong,Li, Qiong,Guo, Anping,Ma, Zilong,Peng, Ming,Xu, Pengwei,Xu, Junyang,Liu, Na,Baudouin, Luc,Bocs, Stephanie,Armero, Alix,Baudouin, Luc,Bocs, Stephanie,Armero, Alix,Issali, Auguste Emmanuel. 2017

[8]Genomic sequencing and analysis of Chilli ringspot virus, a novel potyvirus. Gong, Dian,Wang, Jian-Hua,Lin, Zhan-Song,Zhang, Shao-Yan,Zhang, Yu-Liang,Yu, Nai-Tong,Liu, Zhi-Xin,Gong, Dian,Lin, Zhan-Song,Zhang, Shao-Yan,Yu, Nai-Tong,Xiong, Zhongguo,Xiong, Zhongguo. 2011

[9]Complete genomic sequence of a Pineapple mealybug wilt-associated virus-1 from Hainan Island, China. Yu, Naitong,Luo, Zhiwen,Fan, Hongyan,Zhang, Zhili,Li, Xianghong,He, Fan,Yu, Naitong,Wang, Jianhua,Liu, Zhixin.

[10]Whole genome re-sequencing and transcriptome analysis of the Stylosanthes Anthracnose pathogen Colletotrichum gloeosporioides reveal its characteristics. Huang, H. P.,Huang, H. P.,Huang, J. H.,Zheng, J. L.,Yi, K. X.,Ma, S.. 2016

[11]Genetic Diversity Analysis of Pepper Inbred Lines. Liu, Ziji,Yang, Yan,Cao, Zhenmu. 2015

[12]Characterization of Novel Di-, Tri-, and Tetranucleotide Microsatellite Primers Suitable for Genotyping Various Plant Pathogenic Fungi with Special Emphasis on Fusaria and Mycospherella graminicola. Abd-Elsalam, Kamel A.,Bahkali, Ali H.,Abd-Elsalam, Kamel A.,Verreet, Joseph-Alexander,Abd-Elsalam, Kamel A.,Khiyami, Mohamed A.,Guo, Jian-Rong. 2012

[13]Development of microsatellite markers in Cocos nucifera and their application in evaluating the level of genetic diversity of Cocos nucifera. Xiao, Yong,Luo, Yi,Yang, Yaodong,Fan, Haikuo,Xia, Wei,Zhao, Songlin,Qiao, Fei,Fan, Haikuo,Sager, Ross,Mason, Annaliese S.,Mason, Annaliese S.. 2013

[14]Development of gene-based simple sequence repeat markers for association analysis in Cocos nucifera. Xia, Wei,Xiao, Yong,Liu, Zheng,Luo, Yi,Fan, Haikuo,Yang, Yaodong,Zhao, Songlin,Mason, Annaliese S.,Fan, Haikuo,Peng, Ming. 2014

[15]Characterization and utilization of microsatellites in the Coffea canephora genome to assess genetic association between wild species in Kenya and cultivated coffee. Ogutu, Collins,Fang, Ting,Wang, Lu,Ma, Baiquan,Deng, Xianbao,Owiti, Albert,Han, Yuepeng,Ogutu, Collins,Owiti, Albert,Han, Yuepeng,Yan, Lin,Huang, Lifang,Wang, Xiaoyang,Ogutu, Collins,Fang, Ting,Ma, Baiquan,Owiti, Albert,Nyende, Aggrey. 2016

[16]Construction of Progeny Population with Resistance to Mango Anthracnose and Their Identification by SSRs. Yao, Q. S.,Ma, X. W.,Lei, X. T.,Zhan, R. L.,Wang, S. B.,Wu, H. X..

[17]CONSTRUCTION AND CHARACTERIZATION OF A TENTATIVE AMPLIFIED FRAGMENT LENGTH POLYMORPHISM-SIMPLE SEQUENCE REPEAT LINKAGE MAP OF LAMINARIA (LAMINARIALES, PHAEOPHYTA). Yang, Guanpin,Sun, Ying,Shi, Yuanyuan,Zhang, Linan,Guo, Shanshan,Li, Bingjun,Li, Xiaojie,Li, Zhiling,Cong, Yizhou,Zhao, Yushan,Wang, Wenquan.

[18]云南超高产橡胶树的SSR、AFLP和TRAP分析. 张燕燕,黄华孙,胡彦师,程汉,安泽伟. 2010

[19]热辣2号辣椒纯度鉴定及优良自交系遗传多样性分析. 刘子记,杨衍,孙继华,刘昭华,曹振木. 2014

[20]芒果SSR-PCR反应体系的优化. 黄丽芳,雷新涛,姚全胜,刘洋,苏俊波,詹儒林. 2010

作者其他论文 更多>>
  • MePHD1.2 affects the synthesis of cyanogenic glycosides by regulating of MeCYP79D2 in cassava

    作者：Li, Mengtao;Li, Yajun;Mai, Weitao;Khan, Luqman;Wang, Wenquan;Liu, Jinping;Chen, Xin;Li, Mengtao;Li, Yajun;Mai, Weitao;Khan, Luqman;Wang, Wenquan;Liu, Jinping;Chen, Xin;Li, Mengtao;Zhao, Xiao;Li, Yajun;Li, Yuanchao;Mai, Weitao;Chen, Xin;Zhao, Xiao;Li, Yuanchao;Zhao, Xiaoye;Liang, Qibing;Yin, Qingchun;Li, Yajun;Chen, Xin

    关键词：Cyanogenic glycosides; Cytochrome P450; Manihot esculenta; MePHD1.2

  • Identification of the cassava NADP-ME gene family and its response and regulation in photosynthesis

    作者：Li, Haozheng;Xiao, Jin;Chen, Jiahui;Shen, Xu;Luo, Jia;Guo, Fengguang;Xu, Liangye;Guo, Xin;Wang, Shujuan;Wang, Wenquan;Wang, Shangfei;Wang, Haiyan

    关键词：C-3-C-4 intermediate photosynthesis; NADP-ME; cassava; C-4 evolution; coexpression network

  • Water lily pond: a multiomics database for water lilies

    作者：Zhao, Chengjun;Zhang, Ji;Chen, Yayu;Yang, Lishuang;Chen, Hongliang;Liang, Yufan;Wang, Wenquan;He, Shuang;Luo, Yunqing;Zhang, Junyu;Zhang, Hongbin;Yang, Shuting;Guo, Guilian;Dai, Wenbai;Yang, Zhijuan;Khan, Wasi Ullah;Chen, Fei;Zhao, Chengjun;Zhang, Ji;Chen, Yayu;Yang, Lishuang;Chen, Hongliang;Liang, Yufan;Wang, Wenquan;He, Shuang;Luo, Yunqing;Zhang, Junyu;Zhang, Hongbin;Yang, Shuting;Guo, Guilian;Dai, Wenbai;Khan, Wasi Ullah;Chen, Fei;Chen, Junhao;Zhou, Yuhan;Zhang, Liangsheng;Liu, Guanhua;Jiang, Yifan;Xu, Yingchun;Xue, Jia-yu;Zhu, Tianlong;Garcia-Caparros, Pedro;van de Peer, Yves;van de Peer, Yves;van de Peer, Yves;van de Peer, Yves;Chen, Chengjie

    关键词：

  • Improving gene editing of CRISPR/Cas9 using the callus-specific promoter pYCE1 in cassava (Manihot esculenta Crantz)

    作者：Li, Yuanchao;Li, Youzhi;Li, Yuanchao;Bao, Ruxue;Li, Mengtao;Yang, Haojie;Yao, Yuan;Chen, Xin;Bao, Ruxue;Li, Mengtao;Zeng, Changying;Yang, Haojie;Wang, Wenquan;Yao, Yuan;Chen, Xin;Yao, Yuan;Chen, Xin

    关键词：cassava; callus; promoter; gene editing; target

  • Beyond nitrate transport: AtNRT2.4 responds to local and systemic nitrogen signaling in Arabidopsis

    作者：Zhang, Huaifang;Li, Yanmei;Zhao, Jinling;Mai, Weitao;Khan, Luqman;Wang, Wenquan;Zeng, Changying;Chen, Xin;Zhang, Huaifang;Huang, Jinxia;Li, Yanmei;Zhao, Jinling;Mai, Weitao;Chen, Xin;Zhang, Meng

    关键词：Nitrate deficiency; Local N-deficiency signals; Systemic nitrate signals; Root architecture; Anthocyanin accumulation

  • Advancements and strategies of genetic improvement in cassava (Manihot esculenta Crantz): from conventional to genomic approaches

    作者：Xiao, Liang;Cheng, Dong;Yan, Huabing;Ou, Wenjun;Li, Kaimian;Chen, Xin;Rabbi, Ismail Yusuf;Wang, Wenquan

    关键词：

  • Pan-genome and haplotype map of cassava cultivars and wild ancestors provide insights into its adaptive evolution and domestication

    作者：Xia, Zhiqiang;Zhou, Xincheng;Jiang, Sirong;Chen, Fei;Zou, Meiling;Xu, Liangye;Guo, Xin;Wang, Shujuan;Li, Mengtao;Liu, Shisheng;Bao, Yuting;Zhang, Chenji;Xiao, Jianjia;Guo, Fengguang;Shen, Xu;Li, Haozheng;Zhang, Huaifang;He, Shuang;Wan, Yinglang;Chen, Yinhua;Huang, Dongyi;Li, Bin;Peng, Ming;Chen, Xin;Wang, Wenquan;Du, Zhenglin;Chen, Meili;Zhao, Wenming;Xiao, Jingfa;Du, Zhenglin;Chen, Meili;Zhao, Wenming;Xiao, Jingfa;Zhou, Xincheng;Wang, Haiyan;Lu, Cheng;Peng, Ming;Chen, Xin;Zhu, Tingting;Wang, Le;Luo, Ming-Cheng;Qiao, Fei;Li, Kaimian;Carvalho, Luiz;Lopez-Lavalle, Luis Augusto Becerra;Zhang, Xiaofei;Ceballos, Hernan;Wang, Zhenyu;Li, Yuanchao;Zhao, Long;Yan, Huabing;Qin, Xiaochun;Ma, Ling;Zhang, Weixiong;Moller, Birger Lindberg

    关键词：genome; pan-genome; structural variations; selective sweeping; evolution and domestication; cassava

置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：中国热带农业科学院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台