您好,欢迎访问中国水产科学研究院 机构知识库!

Genetics and phylogeny of genus Coilia in China based on AFLP markers

文献类型: 外文期刊

作者: Yang Qiaoli 1 ; Han Zhiqiang 1 ; Sun Dianrong 2 ; Xie Songguang 3 ; Lin Longshan 4 ; Gao Tianxiang 1 ;

作者机构: 1.Ocean Univ China, Minist Educ, Key Lab Mariculture, Qingdao 266003, Peoples R China

2.Chinese Acad Fishery Sci, S China Sea Fisheries Res Inst, Guangzhou 510300, Guangdong, Peoples R China

3.Chinese Acad Sci, Inst Hydrobiol, Wuhan 430072, Peoples R China

4.State Ocean Adm, Inst Oceanog 3, Xiamen 361005, Peoples R China

关键词: Coilia;phylogeny;fingerprint;species identification;AFLP

期刊名称:CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY ( 影响因子:1.068; 五年影响因子:0.983 )

ISSN: 0254-4059

年卷期: 2010 年 28 卷 4 期

页码:

收录情况: SCI

摘要: The taxonomy of Coilia has been extensively studied in China, and yet phylogenetic relationships among component taxa remain controversial. We used a PCR-based fingerprinting technique, amplified fragment length polymorphism (AFLP) to characterize and identify all four species of Coilia in China. We examined the genetic relationships of the four species of Coilia and a subspecies of Coilia nasus with AFLP. A total of 180 AFLP loci were generated from six primer combinations, of which 76.11% were polymorphic. The mean genetic distance between pairs of taxa ranged from 0.047 to 0.596. The neighbor-joining tree and UPGMA dendrogram resolved the investigated species into three separate lineages: (1) C. mystus, (2) C. grayii and (3) C. brachygnathus, C. nasus, and C. nasus taihuensis. Phylogenetic analysis of the AFLP data is inconsistent with current morphological taxonomic systems. The AFLP data indicated a close relationship among C. brachygnathus, C. nasus taihuensis, and C. nasus. Therefore, the two species described under Coilia (C. brachygnathus and C. nasus taihuensis) are treated as synonyms of C. nasus.

  • 相关文献

[1]The complete mitochondrial genome sequence of Hemibagrus sp. (Siluriformes: Bagridae), molecular data for species identification. Zhou, Can-Lin,Zhou, Can-Lin,Tian, Juan,Yang, Chang-Geng. 2016

[2]Comparative analysis of two-component signal transduction systems in six Synechococcus strains: Two-component signal transduction systems in Synechococcus. Xiaowen Zhang,Naihao Ye,Xiangyu Guan,Chengwei Liang,Song Qin. 2009

[3]Scylla paramamosain (Estampador) the most common mud crab (Genus Scylla) in China: evidence from mtDNA. Ma, Ling-Bo,Zhang, Feng-Ying,Ma, Chun-Yan,Qiao, Zhen-Guo. 2006

[4]Complete mitochondrial genome of the sea cucumber Stichopus sp and its application in the identification of this species. Fan, Sigang,Hu, Chaoqun,Zhang, Lvping,Sun, Hongyan,Luo, Peng,Fan, Sigang,Wen, Jing. 2012

[5]The complete mitochondrial genome sequence of Takifugu flavidus (Tetraodontiformes: Tetrodontidae). Liu, Yongfu,Li, Chao,Tong, Aiping,Zhou, Qin,Liu, Haijin.

[6]DNA barcoding reveals mislabeling of imported fish products in Nansha new port of Guangzhou, Guangdong province, China. Yan, Shuai,Lai, Guiyan,Li, Li,Xiao, Hao,Zhao, Ming,Wang, Ming,Wang, Ming.

[7]Species identification of fish maw (Porcupinefish) products sold on the market using DNA sequencing of 16S rRNA and COI genes. Zeng, Ling,Chen, Ziming,Wen, Jing,Sun, Yulin,Chen, Daohai,Zhao, Juan,Fan, Sigang,Xu, Youhou. 2018

[8]The complete mitochondrial genome sequence of Pampus argenteus ( Perciformes: Stromateidae). Sun, Dandan,Cheng, Qiqun,Qiao, Huiying,Chen, Ying,Sun, Dandan,Qiao, Huiying,Chen, Ying. 2016

[9]Species identification of Chinese sturgeon using acoustic descriptors and ascertaining their spatial distribution in the spawning ground of Gezhouba Dam. Tao JiangPing,Qiao Ye,Chang JianBo,Tao JiangPing,Qiao Ye,Chang JianBo,Tao JiangPing,Tan XiChang,Tao JiangPing,Tan XiChang. 2009

[10]A species-specific primer pair for distinguishing between Paramisgurnus dabryanus and Misgurnus anguillicaudatus based on mitochondrial DNA polymorphisms. Liu, Yongfu,Liu, Yongfu,Liu, Haijin,Hou, Jilun,Wang, Guixing,Zhang, Xiaoyan.

[11]Complete mitochodrial genome of Vanmanenia pingchowensis (Cypriniformes, Cyprinidae). Liang, Zhiqiang,Wei, Qiwei,Liang, Zhiqiang,Wei, Qiwei,Liang, Zhiqiang,Wang, Chongrui,Wu, Yuanan,Li, Hong,Yuan, Xiping.

[12]The complete mitochondrial genomes of largemouth bass of the northern subspecies (Micropterus salmoides salmoides) and Florida subspecies (Micropterus salmoides floridanus) and their applications in the identification of largemouth bass species. Li, Sheng-Jie,Bai, Jun-Jie,Cai, Lei,Ma, Dong-Mei,Du, Fang-Fang,Cai, Lei,Du, Fang-Fang.

[13]Genetic identification of the caviar-producing Amur and Kaluga sturgeons revealed a high level of concealed hybridization. Boscari, Elisa,Congiu, Leonardo,Barmintseva, Anna,Mugue, Nikolai S.,Barmintseva, Anna,Mugue, Nikolai S.,Zhang, Shuhuan,Yue, Huamei,Li, Chuangju,Wei, Qiwei W.,Shedko, Sergei V.,Lieckfeldt, Dietmar,Ludwig, Arne,Ludwig, Arne,Congiu, Leonardo.

[14]Mitochondrial DNA as effective molecular markers for the genetic variation and phylogeny of the family Osteoglossidae. Mu, Xi-dong,Wang, Xue-jie,Song, Hong-mei,Yang, Ye-xin,Luo, Du,Gu, Dang-en,Xu, Meng,Liu, Chao,Luo, Jian-ren,Hu, Yin-chang.

[15]A survey of genetic changes and search for sex-specific markers by AFLP and SAMPL in a breeding program of Chinese shrimp (Penaeus chinensis). Zhang, LS,Kong, XY,Yu, Z,Kong, J,Chen, LM. 2004

[16]First genetic linkage map for the mud crab (Scylla paramamosain) constructed using microsatellite and AFLP markers. Ma, H. Y.,Li, S. J.,Feng, N. N.,Ma, C. Y.,Wang, W.,Chen, W.,Ma, L. B.,Ma, H. Y.,Li, S. J.,Feng, N. N.,Ma, C. Y.,Wang, W.,Chen, W.,Ma, L. B.. 2016

[17]A genetic linkage map of marine shrimp Penaeus (Fenneropenaeus) chinensis based on AFLP, SSR, and RAPD markers. Liu Bo,Wang Qingyin,Li Jian,Liu Ping,He Yuying,Liu Bo. 2010

[18]AFLP analysis on genetic diversity and population structure of small yellow croaker Larimichthys polyactis. Lin, Long Shan,Ying, Yi Ping,Xiao, Yong Shuang,Gao, Tian Xiang,Lin, Long Shan,Han, Zhi Qiang,Gao, Tian Xiang. 2009

[19]Genetic variation in wild and cultured populations of the pearl oyster Pinctada fucata from southern China. Yu, Da Hui,Chu, Ka Hou. 2006

[20]AFLP-based genetic linkage map of marine shrimp Penaeus (Fenneropenaeus) chinensis. Li, Zhaoxia,Li, Jian,Wang, Qingyin,He, Yuying,Liu, Ping. 2006

作者其他论文 更多>>