Genomic prediction with NetGP based on gene network and multi-omics data in plants

Zhao, Longyang; Tang, Ping; Liu, Jianxiang; Xu, Zhi; Luo, Jinjing; Peng, Xin; Shen, Mengyuan; Wang, Chengrui; Zhao, Junliang; Zhou, Degui; Chen, Yibo; Liu, Qi; Peng, Xin; Shen, Mengyuan; Zhao, Junliang; Zhou, Degui; Chen, Yibo; Liu, Qi; Peng, Xin; Shen, Mengyuan; Zhao, Junliang; Zhou, Degui; Chen, Yibo; Liu, Qi; Peng, Xin; Shen, Mengyuan; Zhao, Junliang; Zhou, Degui; Chen, Yibo; Liu, Qi; Wang, Chengrui; Wang, Runfeng; Fan, Zhilan; Tang, Xiaoyan; SCI

机构： Guilin Univ Elect Technol, Guilin, Peoples R China; Guangdong Acad Agr Sci, Rice Res Inst, Guangzhou, Peoples R China; Minist Agr & Rural Affairs, Coconstruct Minist & Prov, Key Lab Genet & Breeding High Qual Rice Southern C, Guangzhou, Peoples R China; Guangdong Key Lab New Technol Rice Breeding, Guangzhou, Peoples R China; Guangdong Rice Engn Lab, Guangzhou, Peoples R China; Guangdong Acad Agr Sci, Crops Res Inst, Guangdong Prov Key Lab Crop Genet Improvement, Guangzhou, Peoples R China; Beijing Normal Univ, Hong Kong Baptist Univ United Int Coll, Zhuhai, Peoples R China; South China Normal Univ, Sch Life Sci, Guangdong Prov Key Lab Biotechnol Plant Dev, Guangzhou, Guangdong, Peoples R China;

关键词： genomic selection; feature selection; deep learning; multi-omics predictions; gene network

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Accumulation of Water-Soluble Polysaccharides during Lychee Pulp Fermentation with Lactiplantibacillus plantarum Involves Endoglucanase Expression

Huang, Guitao; Zou, Xiaoqin; Dong, Lihong; Deng, Mei; Zhang, Ruifen; Huang, Fei; Zhang, Mingwei; Huang, Guitao; Zhang, Mingwei; Su, Dongxiao; Lee, Yuan-kun; SCI

机构： Guangdong Acad Agr Sci, Minist Agr & Rural Affairs, Sericultural & Agrifood Res Inst, Guangdong Key Lab Agr Prod Proc,Key Lab Funct Food, Guangzhou 510610, Peoples R China; Huazhong Agr Univ, Coll Food Sci & Technol, Wuhan 430070, Peoples R China; Guangzhou Univ, Sch Chem & Chem Engn, Guangzhou 510006, Peoples R China; Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Microbiol & Immunol, Singapore 117597, Singapore;

关键词： lychee; polysaccharides; Lactobacillus; endoglucanase; galactosidase

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Centenary Progress on Orchidaceae Research: A Bibliometric Analysis

Wei, Yonglu; Li, Jie; Jin, Jianpeng; Gao, Jie; Xie, Qi; Lu, Chuqiao; Zhu, Genfa; Yang, Fengxi; Jin, Jianpeng; SCI

机构： Guangdong Acad Agr Sci, Environm Hort Res Inst, Guangdong Key Lab Ornamental Plant Germplasm Innov, Guangzhou 510640, Peoples R China; Beijing Forestry Univ, Sch Landscape Architecture, Beijing 100083, Peoples R China;

关键词： Orchidaceae; bibliometric analysis; web of science; co-word analysis; phylogenetics

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PpNAP4 and ethylene act in a regulatory loop to modulate peach fruit ripening and softening

Dai, Jieyu; Xu, Ze; Zhang, Xingzhen; Fang, Zhouheng; Zhu, Jingwen; Kang, Tongyang; Xu, Yuting; Hu, Yanan; Zhao, Caiping; Xu, Ze; Cao, Lijun; Cao, Lijun; SCI

机构： Northwest A&F Univ, Coll Hort, Yangling 712100, Peoples R China; Guangdong Acad Agr Sci, Inst Fruit Tree Res, Key Lab South Subtrop Fruit Biol & Genet Resource, Guangdong Prov Key Lab Trop & Subtrop Fruit Tree R, Guangzhou 510640, Peoples R China; Duke Univ, Howard Hughes Med Inst, Durham, NC 27708 USA; Duke Univ, Dept Biol, Box 90338, Durham, NC 27708 USA;

关键词： Peach fruit; Ripening; Softening; PpNAP4; PpNAP6; NAC transcription factor

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Removal of antibiotic resistance from wastewater in aquatic ecosystems dominated by submerged macrophytes

Zhang, Rong-min; Tan, Hui-zhen; Huang, Wen-qing; Li, Ling-lin; Li, Xin-ting; Xie, Jie; Lian, Xin-lei; Huang, Xian-hui; Zhang, Rong-min; Tan, Hui-zhen; Huang, Wen-qing; Li, Ling-lin; Li, Xin-ting; Xie, Jie; Lian, Xin-lei; Huang, Xian-hui; Chen, Xiao-jie; Li, Ya-fei; Chong, Yun-xiao; SCI

机构： South China Agr Univ, Guangdong Prov Key Lab Vet Pharmaceut Dev & Safety, Guangzhou, Peoples R China; South China Agr Univ, Coll Vet Med, Guangdong Lab Lingnan Modern Agr, Natl Risk Assessment Lab Antimicrobial Resistance, Guangzhou, Peoples R China; Chinese Acad Agr Sci, Feed Res Inst, Key Lab Anim Antimicrobial Resistance Surveillance, Minist Agr & Rural Affairs, Beiling 100081, Peoples R China; Guangdong Acad Agr Sci, Inst Qual Stand & Monitoring Technol Agroprod, Guangzhou 510640, Peoples R China; South China Agr Univ, Coll Nat Resources & Environm, Guangdong Prov Key Lab Agr & Rural Pollut Abatemen, Guangzhou 510642, Peoples R China;

关键词： Submerged macrophytes; Antibiotic resistance; Constructed wetland

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The role of pangenomics in orphan crop improvement

Hu, Haifei; Zhao, Junliang; Hu, Haifei; Zhao, Junliang; Hu, Haifei; Zhao, Junliang; Thomas, William J. W.; Batley, Jacqueline; Edwards, David; Edwards, David; SCI

机构： Guangdong Acad Agr Sci, Rice Res Inst, Guangzhou, Peoples R China; Minist Agr & Rural Affairs, Key Lab Genet Breeding High Qual Rice Southern Chi, Guangzhou, Peoples R China; Guangdong Key Lab Rice Sci & Technol, Guangzhou, Peoples R China; Univ Western Australia, Sch Biol Sci, Perth, WA, Australia; Univ Western Australia, Ctr Appl Bioinformat, Perth, WA, Australia;

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Foliar-applied zinc promotes cadmium allocation from leaf surfaces to grains in rice

Liu, Ya-Ting; Yan, Bo-Fang; Cai, Xuan; Zheng, Hong -Xiang; Qiu, Rong-Liang; Tang, Ye -Tao; Yan, Bo-Fang; Yan, Bo-Fang; Qiu, Rong-Liang; Tang, Ye -Tao; Qiu, Rong-Liang; SCI

机构： Sun Yat Sen Univ, Sch Environm Sci & Engn, Guangzhou 510006, Peoples R China; Guangdong Acad Agr Sci, Inst Facil Agr, Guangzhou 510640, Peoples R China; Sun Yat Sen Univ, Guangdong Prov Key Lab Environm Pollut Control & R, Guangzhou 510006, Peoples R China; South China Agr Univ, Coll Nat Resources & Environm, Guangdong Prov Key Lab Agr & Rural Pollut Abatemen, Guangzhou 510642, Peoples R China;

关键词： Atmospheric deposition; Isotope labelling; Metal interaction; Phloem; Cell wall

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Diversification and evolution of serine/arginine-rich splicing factors in plants

Guo, Mingxi; Liang, Chao; Cui, Mingyang; Luo, Linlin; Gao, Zhongtian; Chen, Haolang; Xie, Qi; Cui, Jie; Liu, Lin; Mo, Beixin; Gao, Lei; Luo, Linlin; Xie, Qi; SCI

机构： Shenzhen Univ, Coll Life Sci & Oceanog, Guangdong Prov Key Lab Plant Epigenet, Shenzhen 518060, Peoples R China; Shenzhen Hongshan Middle Schoool, Shenzhen 518060, Peoples R China; Inst Environm Hort, Guangdong Acad Agr Sci, Guangzhou 510640, Guangdong, Peoples R China;

关键词： SRSFs; alternative splicing; phylogenetic analysis; molecular evolution; origin; diversification

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Transcriptomic and proteomic analysis of the jejunum revealed the effects and mechanism of protocatechuic acid on alleviating Salmonella typhimurium infection in chickens

Zhang, Sheng; Wang, Qin; Yao, Xiangtian; Dong, Jingjing; Li, Guanhuo; Jiang, Shouqun; Wang, Yibing; Yao, Xiangtian; Li, Guanhuo; Zang, Yingan; SCI

机构： Guangdong Acad Agr Sci, Inst Anim Sci, State Key Lab Swine & Poultry Breeding Ind, Key Lab Anim Nutr & Feed Sci South China,Minist Ag, Guangzhou 510640, Guangdong, Peoples R China; Zhongkai Univ Agr & Engn, Guangzhou 510225, Guangdong, Peoples R China;

关键词： Salmonella typhimurium; Protocatechuic acid; Immunity; Chickens; Omics analysis

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Identification of an ethylene-responsive and cell wall-secreting β-1,3-glucanase, VvGLU1, in the early cell regrowth of grape winter buds triggered by exogenous dormancy releasers

Shi, Zhaowan; Shi, Zhaowan; Wu, Jiamin; Mo, Hairuo; Pang, Xuequn; Shi, Zhaowan; Xue, Weiwen; Zhang, Zhaoqi; SCI

机构： Guangdong Acad Agr Sci, Inst Facil Agr, Guangzhou 510640, Peoples R China; South China Agr Univ, Coll Life Sci, Guangzhou 510642, Peoples R China; Chinese Acad Forestry, Res Inst Trop Forestry, Guangzhou, Peoples R China; South China Agr Univ, Coll Hort, Guangzhou 510642, Peoples R China;

关键词： Vitis vinifera; Bud; Dormancy; Cell wall; beta-1,3-glucanase; Hydrogen cyanamide; Ethylene

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