Characterisation of the complete chloroplast genome of the common bean, Phaseolus vulgaris L.
文献类型： 外文期刊
作者： Meng, Xianxin 1 ; Li, Ming 1 ;
作者机构： 1.Northeast Agr Univ, Coll Agr, Harbin 150030, Heilongjiang, Peoples R China
2.Heilongjiang Acad Agr Sci, Crop Breeding Inst, Harbin, Heilongjiang, Peoples R China
关键词： Phaseolus vulgaris L.; common bean; chloroplast genome; phylogenetic analysis; HomBlocks
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.658； 五年影响因子：0.674 ）
ISSN： 2380-2359
年卷期： 2018 年 3 卷 2 期
页码：
收录情况： SCI
摘要： Common bean (Phaseolus vulgaris L.) is the most important grain legume in the human diet and has a role in sustainable agriculture. In this study, we obtained the complete chloroplast genome sequence of common bean using BGISEQ-500 sequencing. Its chloroplast genome size has 155,622 bp, containing a large single copy region (84,924 bp), a small single copy region (18,570 bp) and a pair of IR regions (26,064 bp). The overall GC contents of the chloroplast genome were 37.9%. This circular genome contains 131 annotated genes, including 85 protein-coding genes, 37 tRNAs, and 8 rRNAs. The phylogenetic analysis using maximum likelihood (ML) method showed that Common bean has the closest relationship with Phaseolus coccineus L. This complete chloroplast genomes can be subsequently used for the genetic breeding and agricultural development of this valuable species.
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