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The genome sequence of segmental allotetraploid peanut Arachis hypogaea

文献类型: 外文期刊

作者: Bertioli, David J. 1 ; Jenkins, Jerry 4 ; Clevenger, Josh 1 ; Dudchenko, Olga 5 ; Gao, Dongying 1 ; Seijo, Guillerm 1 ;

作者机构: 1.Univ Georgia, Ctr Appl Genet Technol, Athens, GA 30602 USA

2.Univ Georgia, Inst Plant Breeding Genet & Genom, Athens, GA 30602 USA

3.Univ Georgia, Dept Crop & Soil Sci, Athens, GA 30602 USA

4.HudsonAlpha Inst Biotechnol, Huntsville, AL 35806 USA

5.Baylor Coll Med, Ctr Genome Architecture, Houston, TX 77030 USA

6.UNNE, CONICET, Inst Bot Nordeste, Corrientes, Argentina

7.Univ Nacl Nordeste, FACENA, Corrientes, Argentina

8.Univ Georgia, Dept Plant Pathol, Tifton, GA 31793 USA

9.Iowa State Univ, Interdept Genet Grad Program, Ames, IA USA

10.Natl Ctr Genome Resources, Santa Fe, NM USA

11.Int Crops Res Inst Semi Arid Trop, Ctr Excellence Genom & Syst Biol, Hyderabad, Telangana, India

12.Iowa State Univ, Dept Comp Sci, Ames, IA USA

13.Univ Georgia, Dept Hort, Tifton, GA USA

14.CNRS, UMR5096, Lab Genome & Dev Plantes, Perpignan, France

15.Univ Perpignan, UMR5096, Lab Genome & Dev Plantes, Perpignan, France

16.ARS, Crop Protect & Management Res Unit, USDA, Tifton, GA USA

17.LG Chem, Corp R&D, Seoul, South Korea

18.IRD, UMR232, Diversite Adaptat & Dev Plantes, Montpellier, France

19.Univ Montpellier, UMR232, Diversite Adaptat & Dev Plantes, Montpellier, France

20.Embrapa Genet Resources & Biotechnol, Brasilia, DF, Brazil

21.Kazusa DNA Res Inst, Dept Frontier Res & Dev, Kisarazu, Japan

22.Natl Inst Plant Genome Res, New Delhi, India

23.ARS, Corn Insects & Crop Genet Res Unit, USDA, Ames, IA USA

24.Henan Acad Agr Sci, Ind Crops Res Inst, Henan Prov Key Lab Genet Improvement Oil Crops, Zhengzhou, Henan, Peoples R China

25.Minist Agr & Rural Affairs, Key Lab Oil Crops Huanghuaihai Plains, Zhengzhou, Henan, Peoples R China

26.Univ Calif Davis, Genome Ctr, Davis, CA 95616 USA

27.ARS, Crop Genet & Breeding Res Unit, USDA, Tifton, GA USA

28.ARS, Genom & Bioinformat Res Unit, USDA, Stoneville, MS USA

29.Joint Genome Inst, Dept Energy, Walnut Creek, CA USA

期刊名称:NATURE GENETICS ( 影响因子:38.33; 五年影响因子:36.431 )

ISSN: 1061-4036

年卷期: 2019 年 51 卷 5 期

页码:

收录情况: SCI

摘要: Like many other crops, the cultivated peanut (Arachis hypogaea L.) is of hybrid origin and has a polyploid genome that contains essentially complete sets of chromosomes from two ancestral species. Here we report the genome sequence of peanut and show that after its polyploid origin, the genome has evolved through mobile-element activity, deletions and by the flow of genetic information between corresponding ancestral chromosomes (that is, homeologous recombination). Uniformity of patterns of homeologous recombination at the ends of chromosomes favors a single origin for cultivated peanut and its wild counterpart A. monticola. However, through much of the genome, homeologous recombination has created diversity. Using new polyploid hybrids made from the ancestral species, we show how this can generate phenotypic changes such as spontaneous changes in the color of the flowers. We suggest that diversity generated by these genetic mechanisms helped to favor the domestication of the polyploid A. hypogaea over other diploid Arachis species cultivated by humans.

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