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Evolution of the germline mutation rate across vertebrates

文献类型: 外文期刊

作者: Bergeron, Lucie A. 1 ; Besenbacher, Soren 2 ; Zheng, Jiao 3 ; Li, Panyi 3 ; Bertelsen, Mads Frost 5 ; Quintard, Benoit 6 ; Hoffman, Joseph I. 7 ; Li, Zhipeng 9 ; Leger, Judy St 10 ; Shao, Changwei 11 ; Stiller, Josefin 1 ; Gilbert, M. Thomas P. 12 ; Schierup, Mikkel H. 14 ; Zhang, Guojie 1 ;

作者机构: 1.Univ Copenhagen, Villum Ctr Biodivers Genom, Dept Biol, Sect Ecol & Evolut, Copenhagen, Denmark

2.Aarhus Univ, Dept Mol Med, Aarhus, Denmark

3.BGI Shenzhen, Shenzhen, Peoples R China

4.Univ Chinese Acad Sci, BGI Educ Ctr, Shenzhen, Peoples R China

5.Copenhagen Zoo, Frederiksberg, Denmark

6.Parc Zoolog & Bot Mulhouse, Mulhouse, France

7.Bielefeld Univ, Dept Anim Behav, Bielefeld, Germany

8.British Antarctic Survey, Cambridge, England

9.Jilin Agr Univ, Coll Anim Sci & Technol, Changchun, Peoples R China

10.Cornell Univ, Dept Biomed Sci, Ithaca, NY USA

11.Yellow Sea Fisheries Res Inst, Chinese Acad Fishery Sci, Key Lab Sustainable Dev Marine Fisheries, Minist Agr & Rural Affairs, Qingdao, Peoples R China

12.Univ Copenhagen, GLOBE Inst, Ctr Evolutionary Hologen, Copenhagen, Denmark

13.Univ Museum, NTNU, Trondheim, Norway

14.Aarhus Univ, Bioinformat Res Ctr, Aarhus, Denmark

15.Zhejiang Univ Sch Med, Womens Hosp, Ctr Evolutionary & Organismal Biol, Hangzhou, Peoples R China

16.Zhejiang Univ Med Ctr, Liangzhu Lab, Hangzhou, Peoples R China

17.Chinese Acad Sci, Kunming Inst Zool, State Key Lab Genet Resources & Evolut, Kunming, Peoples R China

期刊名称:NATURE ( 影响因子:64.8; 五年影响因子:60.9 )

ISSN: 0028-0836

年卷期: 2023 年 615 卷 7951 期

页码:

收录情况: SCI

摘要: The germline mutation rate determines the pace of genome evolution and is an evolving parameter itself1. However, little is known about what determines its evolution, as most studies of mutation rates have focused on single species with different methodologies2. Here we quantify germline mutation rates across vertebrates by sequencing and comparing the high-coverage genomes of 151 parent- offspring trios from 68 species of mammals, fishes, birds and reptiles. We show that the per-generation mutation rate varies among species by a factor of 40, with mutation rates being higher for males than for females in mammals and birds, but not in reptiles and fishes. The generation time, age at maturity and species-level fecundity are the key life-history traits affecting this variation among species. Furthermore, species with higher long-term effective population sizes tend to have lower mutation rates per generation, providing support for the drift barrier hypothesis3. The exceptionally high yearly mutation rates of domesticated animals, which have been continually selected on fecundity traits including shorter generation times, further support the importance of generation time in the evolution of mutation rates. Overall, our comparative analysis of pedigree-based mutation rates provides ecological insights on the mutation rate evolution in vertebrates.

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