Comprehensive Analysis of Jumonji Domain C Family from Citrus grandis and Expression Profilings in the Exocarps of "Huajuhong" (Citrus grandis "Tomentosa") during Various Development Stages
文献类型： 外文期刊
作者： Tian, Yuzhen 1 ; Fan, Ruiyi 1 ; Zeng, Jiwu 1 ;
作者机构： 1.Guangdong Acad Agr Sci, Inst Fruit Tree Res, Guangzhou 510640, Peoples R China
2.Minist Agr & Rural Affairs, Key Lab South Subtrop Fruit Biol & Genet Resource, Guangzhou 510640, Peoples R China
3.Guangdong Prov Key Lab Trop & Subtrop Fruit Tree, Guangzhou 510640, Peoples R China
关键词： Citrus grandis; "Huajuhong"; jumonji C domain (JMJC); histone demethylation; epigenetic regulation
期刊名称：HORTICULTURAE （ 影响因子：2.923； 五年影响因子：3.582 ）
ISSN：
年卷期： 2021 年 7 卷 12 期
页码：
收录情况： SCI
摘要： Citrus grandis "Tomentosa" ("Huajuhong") is a famous Traditional Chinese Medicine. In this study, a total of 18 jumonji C (JMJC) domain-containing proteins were identified from C. grandis. The 18 CgJMJCs were unevenly located on six chromosomes of C. grandis. Phylogenetic analysis revealed that they could be classified into five groups, namely KDM3, KDM4, KDM5, JMJC, and JMJD6. The domain structures and motif architectures in the five groups were diversified. Cis-acting elements on the promoters of 18 CgJMJC genes were also investigated, and the abscisic acid-responsive element (ABRE) was distributed on 15 CgJMJC genes. Furthermore, the expression profiles of 18 CgJMJCs members in the exocarps of three varieties of "Huajuhong", for different developmental stages, were examined. The results were validated by quantitative real-time PCR (qRT-PCR). The present study provides a comprehensive characterization of JMJC domain-containing proteins in C. grandis and their expression patterns in the exocarps of C. grandis "Tomentosa" for three varieties with various development stages.
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