Regulatory protein genes and microRNAs in response to selenium stimuli in Pueraria lobata (Willd.) Ohwi
文献类型: 外文期刊
作者: Li, Yanni 1 ; He, Meijun 2 ; Li, Jishuang 1 ; Yao, Yiwei 1 ; Zhu, Li 3 ; Wu, Bin 1 ;
作者机构: 1.Chinese Acad Med Sci & Peking Union Med Coll, Inst Med Plant Dev, Beijing 100193, Peoples R China
2.Hubei Acad Agr Sci, Inst Chinese Med Mat, Enshi 445000, Peoples R China
3.Chinese Acad Agr Sci, Biotechnol Res Inst, Beijing 100081, Peoples R China
期刊名称:METALLOMICS ( 影响因子:4.526; 五年影响因子:4.69 )
ISSN: 1756-5901
年卷期: 2021 年 13 卷 1 期
页码:
收录情况: SCI
摘要: Regulatory protein genes and microRNAs (miRNAs) play important roles in response to abiotic and biotic stress, and the biosynthesis of secondary metabolites in plants. However, their responses to selenium (Se) stimuli have not been comprehensively studied in Pueraria lobata (Willd.) Ohwi, a selenocompound-rich medicinal and edible plant. In this study, we identified a total of 436/556/1161/624 transcription factors, 134/157/308/172 transcriptional regulators, and 341/456/250/518 protein kinases, which were co-expressed with at least one selenocompound-related structural gene/sulfate transporter or phosphate transporter/reactive oxygen species (ROS) scavenging structural gene/isoflavone-related structural gene, respectively. Then, we identified a total of 87 expressed miRNAs by Se disposure, in which 11 miRNAs, including miR171f-3p, miR390b-3P, miR-N111b, miR-N118, miR-N30, miR-N38-3P, miR-N61a, miR-N61b, miR-N80-3p, miR-N84-3P, and miR-N90.2-3P, were significantly upregulated. We also identified a total of 1172 target genes for the 87 expressedmiRNAs. Gene Ontology enrichment analysis of these target genes showed that regulation of transcription, DNA-templated, integral component of membrane, nucleus, ATP binding, and plasma membrane are the top five subclassifications. Finally, we revealed that 5miRNAs targeted 10 regulatory protein genes, which are highly correlated with at least one selenocompound-related structural gene or transporter gene; 5 miRNAs targeted 10 regulatory protein genes, which are highly correlated with at least one ROS scavenging structural gene; and 5 miRNAs targeted 9 regulatory protein genes, which are potentially involved in the isoflavone biosynthesis. Overall, the study provides us the comprehensive insight into the roles of regulatory proteins and miRNAs in response to Se stimuli in P. lobata.
- 相关文献
作者其他论文 更多>>
-
Pueraria thomsonii Benth-Associated Endophytes: A Multifaceted Exploration of Its Bioactive Molecules
作者:Li, Yu;Liu, Yu;Peng, Shiqin;Yuan, Xiaoman;Zhao, Lingyun;Sun, Huiru;Su, Fulian;Huang, Donghai;Pachaiyappan, Saravana Kumar;He, Meijun;Ran, Yalan;Zhao, Lingyun;Sun, Huiru;Su, Fulian
关键词:Endophytes; Bioactive compounds; Antibacterial; Antioxidative; Anticancer
-
Metabolomics-guided identification of compounds with antibacterial and antioxidant activities from Polygonatum sibiricum-derived endophytic fungi
作者:Zhao, Lingyun;Liu, Yu;Sun, Huiru;Luo, Kai;He, Meijun;Zhao, Lingyun;Liu, Yu;Sun, Huiru;Li, Yu;Pachaiyappan, Saravana Kumar;Fang, Xinyue;He, Meijun;Ran, Yalan;Qin, Yang
关键词:Polygonatum sibiricum; Endophytic fungi; Secondary metabolite; Antibacterial activity; Antioxidant activity
-
Production of bioactive compounds from callus of Pueraria thomsonii Benth with promising cytotoxic and antibacterial activities
作者:Li, Yu;Kumar, Pachaiyappan Saravana;Tan, Xuhui;Zhao, Renjun;Ai, Lunqiang;Yuan, Mingyuan;Zhu, Ji;He, Meijun;Qiu, Jiao;Ran, Yalan;Yuan, Mingyuan
关键词:Pueraria thomsonii; Callus culture; Cytotoxicity Activity; Antibacterial Activity; Bioactive compounds
-
Anticancer and antibacterial flavonoids from the callus of Ampelopsis grossedentata; a new weapon to mitigate the proliferation of cancer cells and bacteria
作者:Li, Yu;Kumar, Pachaiyappan Saravana;Tan, Xuhui;He, Meijun;Tan, Shengquan;Huang, Chuying;Qiu, Jiao;Xiang, Zhixin;Luo, Jianqun
关键词:
-
Chloroplast genomes of two Pueraria DC. species: sequencing, comparative analysis and molecular marker development
作者:Li, Jishuang;Yang, Meng;Li, Yanni;Jiang, Mei;Liu, Chang;Wu, Bin;He, Meijun
关键词:chloroplast genome; comparative analysis; molecular marker; Pueraria lobata (Willd; ) Ohwi; Pueraria thomsonii Benth
-
Tailoring enhanced production and identification of isoflavones in the callus cultures of Pueraria thomsonii Benth and its model verification using response surface methodology (RSM): a combined in vitro and statistical optimization
作者:Li, Yu;Kumar, Pachaiyappan Saravana;Liu, Yu;Yuan, Mingyuan;Fang, Xinyue;Tan, Xuhui;Zhao, Renjun;Zhu, Ji;He, Meijun;Qiu, Jiao;Yuan, Mingyuan;Ran, Yalan
关键词:Pueraria thomsonii; Callus induction; Isoflavones; Elicitors; HPLC analysis; RSM
-
Isolation, Antimicrobial Resistance Phenotypes, and Virulence Genes of Bordetella bronchiseptica From Pigs in China, 2018-2020
作者:Zhang, Yue;Yang, Hao;Zhao, Mengfei;Wang, Fei;Song, Wenbo;Hua, Lin;Wang, Lei;Peng, Zhong;Wu, Bin;Zhang, Yue;Yang, Hao;Zhao, Mengfei;Wang, Fei;Song, Wenbo;Hua, Lin;Wang, Lei;Peng, Zhong;Wu, Bin;Guo, Long;Tang, Xibiao;Liang, Wan
关键词:Bordetella bronchiseptica; isolation; antimicrobial resistance; virulence factors encoding genes; pigs