Phylogeography and population genetics of Schizothorax o'connori: strong subdivision in the Yarlung Tsangpo River inferred from mtDNA and microsatellite markers
文献类型: 外文期刊
作者: Guo, Xiang-Zhao 1 ; Zhang, Gui-Rong 1 ; Wei, Kai-Jian 1 ; Yan, Ruo-Jin 1 ; Ji, Wei 1 ; Yang, Rui-Bin 1 ; Wei, Qi-Wei 3 ;
作者机构: 1.Huazhong Agr Univ, Coll Fisheries, Minist Agr, Key Lab Freshwater Anim Breeding, Wuhan 430070, Peoples R China
2.Freshwater Aquaculture Collaborat Innovat Ctr Hub, Wuhan 430070, Peoples R China
3.Chinese Acad Fishery Sci, Yangtze River Fisheries Res Inst, Key Lab Freshwater Biodivers Conservat, Minist Agr, Wuhan 430223, Peoples R China
4.Victoria Univ Wellington, Sch Biol Sci, POB 600, Wellington 6140, New Zealand
期刊名称:SCIENTIFIC REPORTS ( 影响因子:4.379; 五年影响因子:5.133 )
ISSN: 2045-2322
年卷期: 2016 年 6 卷
页码:
收录情况: SCI
摘要: The Qinghai-Tibet Plateau (QTP) is a biodiversity hotspot, resulting from its geological history, contemporary environment and isolation. Uplift of the QTP and Quaternary climatic oscillations are hypothesised to have influenced the genetic diversity, population structure and dynamics of all QTP endemic species. In this study, we tested this hypothesis by assaying variation at two mitochondrial DNA regions (cytochrome b and control region) and at 12 microsatellite loci of seven populations of the endemic fish, Schizothorax o'connori from the Yarlung Tsangpo River (YLTR) on the QTP. Analyses revealed one group of six populations to the west, above the Yarlung Tsangpo Grand Canyon (YTGC), and a second group to the east below the YTGC. Estimates of the timing of this east-west split indicate that these groups represent evolutionarily significant units that have evolved separately and rapidly in the middle Pleistocene, at the time of the Kunlun-Huanghe Movement A Phase and the Naynayxungla glaciation. Population dynamic analyses indicate that S. o'connori experienced a pronounced late Pleistocene expansion during the last interglacial period. The results of this study support the hypotheses that the QTP uplift and Quaternary climatic oscillations have played important roles in shaping the population genetics and dynamics of this endemic fish.
- 相关文献
作者其他论文 更多>>
-
Bioinformatics characteristics and expression analysis of IL-8 and IL-10 in largemouth bass ( Micropterus salmoides ) upon Nocardia seriolae infection
作者:Wang, Qin;Zhao, Zhangchun;Sun, Ruhan;Zhang, Yaqian;Wang, Bingchao;Zhang, Xuezhen;Ji, Wei;Shi, Zechao;Ji, Wei
关键词:Largemouth bass(Micropterussalmoides); IL-8; IL-10; Inflammatory response; Nocardia seriolae
-
Bioinformatics characteristics and expression analysis of TLR3 and its adaptor protein TRIF in largemouth bass (Micropterus salmoides) upon Flavobacterium columnare infection
作者:Zhao, Zhangchun;Liu, Sixue;Wu, Chen;Wang, Qin;Zhang, Yaqian;Wang, Bingchao;Sun, Ruhan;Guo, Mengge;Ji, Wei;Wang, Long;Ji, Wei
关键词:Micropterus salmoides; TLR3; TRIF; Gene expression; Flavobacterium columnare
-
Molecular characterization and expression analyses of five genes involved in the MyD88-dependent pathway of yellow catfish (Pelteobagrus fulvidraco) responding to challenge of Aeromonas hydrophila
作者:Yuan, Yujie;Wang, Qin;Guo, Mengge;Zhao, Zhangchun;Liu, Sixue;Wu, Chen;Sun, Ruhan;Wang, Bingchao;Ji, Wei;Shi, Zechao;Yuan, Le;Ouyang, Gang;Ji, Wei
关键词:Pelteobagrus fulvidraco; MyD88; IRAK4; IRAK1; TRAF6; NF kappa B1; Gene expression; Aeromonas hydrophila
-
Molecular characteristics, polymorphism and expression analysis of mhc II in yellow catfish(pelteobagrus fulvidraco)responding to Flavobacterium columnare infection
作者:Wang, Bingchao;Zhu, Fangzheng;Huang, Zhenyu;Sun, Ruhan;Wang, Qingchao;Ji, Wei;Gang, Ouyang;Shi, Zechao;Ji, Wei
关键词:Yellow catfish (Pelteobagrus fulvidraco); mhc II; Polymorphism; Gene expression; Flavobacterium columnare
-
Molecular characterization, expression and function analysis of interleukin-17B, C and D genes in yellow catfish (Pelteobagrus fulvidraco)
作者:Zhou, Xu;Jiang, Xin-Xin;Zhang, Gui-Rong;Ji, Wei;Ma, Xu-Fa;Wei, Kai-Jian;Zhou, Xu;Jiang, Xin-Xin;Zhang, Gui-Rong;Ji, Wei;Ma, Xu-Fa;Wei, Kai-Jian;Shi, Ze-Chao
关键词:Yellow catfish; IL-17B; IL-17C; IL-17D; Expression; Bioactivity; Phagocytosis; Chemotaxis
-
Blood brain barrier permeability and immune function of brain in rainbow trout responding to IHNV infection
作者:Sun, Ru-Han;Chen, Kai-Wei;Wang, Qin;Huang, Zhen-Yu;Wang, Bing-Chao;Ji, Wei;Shi, Ze-Chao
关键词:Central nervous system; Blood-brain barrier; Immune; Infectious hematopoietic necrosis virus
-
Molecular and functional characterization of teleost-specific Interleukin-17N in yellow catfish (Pelteobagrus fulvidraco)
作者:Zhou, Xu;Jiang, Xin-Xin;Zhang, Gui-Rong;Ji, Wei;Ma, Xu-Fa;Wei, Kai-Jian;Zhou, Xu;Jiang, Xin-Xin;Zhang, Gui-Rong;Ji, Wei;Ma, Xu-Fa;Wei, Kai-Jian;Zhou, Xu;Shi, Ze-Chao;Wei, Kai-Jian
关键词:Yellow catfish; IL-17N; Expression; Bioactivity; Phagocytosis; Chemotaxis